Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60489g00010 ATGGCAGCTGATTCTTATTCTGGCATTCCTACTCCTCCAATAGTTCAAGAAATTGCAAATGGAAATGAGAAAGGACTTGAGCCCCAAATAAATATCCAGGGATACATACTAGGAAACCCTGTAACGACATCTAAAGAAGCAAATTATCGGGTCCAATATGTTCATGGAATGGGATTAATCTCTGATGAACTTTATTTGTCATTGAAGAAAAATTGTAAAGGAGAGTATAAAAATATAGATCCTGAAAATAAATTGTGTTTAAGAGACATGGAGTACTACAACAAGTGTCTTGAAAAAATTGATCTGTTTTTTATTTTAAACCCATTTTGCACCGATGATTGGCTTAAACCACAAGAGAAAGGGATGCAAAGGAGATCTTTGGCTCGAAATATAGAGGCCCGTTTCGAAACTCCTCTTATAGTGCCAGATATAGCCTGCGAGAATTTTCTTTTCTTCCTGTTGACTCAATGGGCCAACCACAAGAGCGTACGCGAGGCACTACACATTCGAGAGGGAACTATAGGAGAATGGTCGCGTTGTTATAAACAAAATTATGAATTTAGCATCTTTAACAGTGTTCCGTTTCATGCAAATCTTAGTGCAAAGGGTTATCGTTCTTTGATTTTCAGTGGAGATCATGATGCAGCAGTTCCTTTTATCTCGACTCAGGCATGGATAAGGTCGCTAAATTACTCCATTGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACCAGGACTTACTCAAACAAAATGACATTTGCAACTTTGAGGGGTGCAGGACATACAGCTGCTGAATTGAAGCCTAATGAAAGTTATGCCATGTTTGTTAGATGGATATCTGATAAGCCTTTGTAA 873 0.3826 MAADSYSGIPTPPIVQEIANGNEKGLEPQINIQGYILGNPVTTSKEANYRVQYVHGMGLISDELYLSLKKNCKGEYKNIDPENKLCLRDMEYYNKCLEKIDLFFILNPFCTDDWLKPQEKGMQRRSLARNIEARFETPLIVPDIACENFLFFLLTQWANHKSVREALHIREGTIGEWSRCYKQNYEFSIFNSVPFHANLSAKGYRSLIFSGDHDAAVPFISTQAWIRSLNYSIVDDWRPWYLNDQVAGYTRTYSNKMTFATLRGAGHTAAELKPNESYAMFVRWISDKPL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60489g00010 290 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 274 IPR001563 GO:0004185|GO:0006508
Stsc60489g00010 290 Gene3D alpha/beta hydrolase 1 290 IPR029058 -
Stsc60489g00010 290 Pfam Serine carboxypeptidase 2 286 IPR001563 GO:0004185|GO:0006508
Stsc60489g00010 290 SUPERFAMILY alpha/beta-Hydrolases 2 289 IPR029058 -
Stsc60489g00010 290 FunFam Carboxypeptidase 145 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60489g00010 Stsc-Chr60489 81698 86714 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60489g00010 135 290 Calmodulin-binding Proteins AT2G22960 57.325 1.11e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60489g00010 K16296 - gmx:100780069 406.757