Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60486g00011 ATGGAGGGTCCTGCTCCTCCTGCGAATGATATGTGCTCGCCCTGCAAGTGCCCCCTCTGCCGACGTCCCATCACTCTCCTCGTCCCCACCGACGACTCCCTCAGCCACCGCCACGACCCCGAGGTTGCTAACGCTCTTCACAAGATCCAGAGATACAATAGATTGTTCGGAGAGCGTGAGGGCGGCCTTCTCCAGAGATTGCAAGATCTTCCATTCCTGCTCCGTCGCCTCCTTCGGGACTTCTCCGATCCTCGCAGATCCCTTCCTCTTGTCATTCGAGCTCGCGTCTACATTGCTGTTAAGTATCGTCTCTTAATATTTTCGATGCAATTTTCTGCTCCTGATCTCAACACATGTCTTGTTTCTTTGTTTACGCAGATGATACTTAGTGTTGTGTACATCATCAGCCCTATAGACATCATTCCAGAAGGGATACTAGGAATAGTTGGACTCTTGGATGATCTGCTCATTCTGCTCATCTGTTTCCTACACGTTGCTGCCCTTTATAGATCAGTACTCTATCTCCGCCACGGTGGTTCCTGA 543 0.5064 MEGPAPPANDMCSPCKCPLCRRPITLLVPTDDSLSHRHDPEVANALHKIQRYNRLFGEREGGLLQRLQDLPFLLRRLLRDFSDPRRSLPLVIRARVYIAVKYRLLIFSMQFSAPDLNTCLVSLFTQMILSVVYIISPIDIIPEGILGIVGLLDDLLILLICFLHVAALYRSVLYLRHGGS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60486g00011 180 PANTHER UNCHARACTERIZED 11 177 IPR038896 GO:0061630
Stsc60486g00011 180 Pfam Protein of unknown function (DUF1232) 127 159 IPR010652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60486g00011 Stsc-Chr60486 34798 35508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60486g00011 13 180 C3H Transcription Factor Family AT1G72175 61.905 5.58e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60486g00011 K15707 - qsu:112001083 147.902