Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60485g00014 ATGTCGTCATCATCATCATTCCAAATATGTTCTATTCTTCGTTTTGAAACACTAAACCTTCATCTCTTTCTTGCTTTCCTTCTATTATTTGTTGTATTCAACTTTTGGTTAGTCCCTGGTGGGCTTGCTTGGGCTCTCTCCAAGGTCCGGTTTTTTCAACTTTCATATGACAACAATGATAGCGAGGGCGACGAAAAAGCTTCAATCCCTGGACCTTCTGGTCTACCAATTCTTGGCCTTGTTTCCGCCTTCACCGGAACCCTAACTCATAGGGTTTTGGCGAATATGGCTGAAACATTCAAGGCCAAGAACTTGATGGCATTTTCTATTGGCTTCACTCGTTTTATTATCTCCACAAACCCTAACACTGCCAAAGAGATTCTCAACAGCTCAGCTTTTGCCGATAGACCTATCAAAGAATCAGCTTATGAGCTTCTCTTCCACCGTGCAATGGGGTTCGCTCCTTATGGGGAGTACTGGAGGAATCTCAGGAGAATCTCCACTACTCATTTGTTCTCTCCACGGAGGATCATTGCCACCGGTAAGTTCAGAGCTAGAGTGGGTGCCAACATGGTGAAAGAGATAGTTGGTTTGATGGAGAAGAAGGGTGAGATTAAGGTTAGAGAAGTGTTGCATTTAGGATCTTTAAACAATGTGATGATGAGTGTGTTTGGGAAAAGCTATGAGTTTGGTGAAGGTGGTAATGGGTGTGAGCTTGAAGGGTTGGTGAGAGAAGGGTATGATCTTCTTGGGGCTTTCAATTGGAGTGACCACTTCCCTTTATTGGGTTGGTTGGATTTGCAAGGTGTGAGGAAGAGGTGTAGGAATCTTGTAATGAAGGTGGATGATTTTGTTGGAAATATCATATTGGAACATAGAATGAAAAGGGTTGATCATGAACACAAGAATACTGCTAATGAAGAAGAAGAAGAAAGCTTAGATGACTTTGTTGATGTGCTACTAAGCTTGGAAAAACAGAGCAAACTTCAACACTCTGATATGATTGCTATCCTTTGGGAAATGATCTTTAGAGGGACTGATACAGTGGCAATATTTTTAGAATGGATTCTTGCAAGGATGGTAATGCACCCTGAAATCCAAGCTAAAGCTCAATCTGAAATTGACACTGTAGTTGGTTATGACCGTACAATCAACGATTTAGACCTTCAAAATCTGCCATACCTACGTGCCATAGTGAAAGAAGCCCTAAGAATGCACCCACCAGGCCCACTACTGTCATGGGCCAGGCTTGCCATCCACGACACCCAAGTGGGCCCCCACTTCATTCCAGCTGGCACAACAGCAATGGTGAACATGTGGGCCATCACGCATGACAAGGATATTTGGCGTGACCCAGATGAGTTCAAGCCAGAGAGGTTCATAGAAGAAGAGGTTCAAATAATGGGGTCTGATCTGAGACTTGCACCGTTTGGTTCTGGAAGAAGGGTTTGTCCTGGCAAGGCTATGGGCTTAGCCACTGTTGAGCTTTGGCTTGGTGTGTTGCTTCAAAGGTTCAAATGGAGGGCTAGAGATGGTGGTGTTGATTTGTCTGAGTGCTTGAAACTTTCTCTGGAGATGAAATCCCCTCTTCTTGTTAAGGCTATTCCAAGATTTGATCTTGTAGGTTAA 1629 0.4365 MSSSSSFQICSILRFETLNLHLFLAFLLLFVVFNFWLVPGGLAWALSKVRFFQLSYDNNDSEGDEKASIPGPSGLPILGLVSAFTGTLTHRVLANMAETFKAKNLMAFSIGFTRFIISTNPNTAKEILNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISTTHLFSPRRIIATGKFRARVGANMVKEIVGLMEKKGEIKVREVLHLGSLNNVMMSVFGKSYEFGEGGNGCELEGLVREGYDLLGAFNWSDHFPLLGWLDLQGVRKRCRNLVMKVDDFVGNIILEHRMKRVDHEHKNTANEEEEESLDDFVDVLLSLEKQSKLQHSDMIAILWEMIFRGTDTVAIFLEWILARMVMHPEIQAKAQSEIDTVVGYDRTINDLDLQNLPYLRAIVKEALRMHPPGPLLSWARLAIHDTQVGPHFIPAGTTAMVNMWAITHDKDIWRDPDEFKPERFIEEEVQIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLGVLLQRFKWRARDGGVDLSECLKLSLEMKSPLLVKAIPRFDLVG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60485g00014 542 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 Coils Coil 306 326 - -
Stsc60485g00014 542 Gene3D Cytochrome P450 60 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 SUPERFAMILY Cytochrome P450 69 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Stsc60485g00014 542 CDD CYP78 101 530 - -
Stsc60485g00014 542 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60485g00014 542 PANTHER CYTOCHROME P450 78A7-RELATED 19 537 - -
Stsc60485g00014 542 FunFam Cytochrome P450 78A5 61 537 - -
Stsc60485g00014 542 Pfam Cytochrome P450 70 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60485g00014 Stsc-Chr60485 83142 85143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60485g00014 19 537 Cytochrome P450 AT1G74110 64.650 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60485g00014 K20619 - gmx:100811042 744.577