Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60485g00005 ATGCCGAAGTCGCACTCATCGTCTTCTCCACCAAAGGCAAGCTCTTCGAGTTTTCCAGCGATCCCTGTATGGAAAGGATTCTTGAACGGTATGAGAGGTACTCATTTGCGGAGAAGCAACTCATTTCAAATGAACAGCAGCCCCCAAGTGAATTTTATGGGGGAGGATCTGGATAGCCTAAGTTTGAAAGAGCTTCAGAATTTGGAACACCAACTTGAATCTGCTCTCAAACACATTAGATCACGGAAGAACCAAGTCATGTATGAATCTATTTCAGAGCTTCAGAAAAAGGATAAGGCACTCCAGGAACAAAACAATGCGCTGGCCAAGAAGATTAAGGAAAAAGAGAAGGCTCAAGAGGAGCAACTTGGCCTGCAAACTACTACCGGTGATGTACCCTCTCTCCTTATAACCGAACCATTGGAGCCCTTCAATAATATTGGAGGCAGTAGTAGTACCCCTCAAGCAGCTGGAGGAGGAGGTGATGGATTATTATTAGGAGATAATGAAGATCAAAGTACTACACCAACTCAACCTAATAATAATCATAGTAATAACCTTCTTCCCCCTTGGATGGTTCGTCCTATAATGAATGAATGA 600 0.4317 MPKSHSSSSPPKASSSSFPAIPVWKGFLNGMRGTHLRRSNSFQMNSSPQVNFMGEDLDSLSLKELQNLEHQLESALKHIRSRKNQVMYESISELQKKDKALQEQNNALAKKIKEKEKAQEEQLGLQTTTGDVPSLLITEPLEPFNNIGGSSSTPQAAGGGGDGLLLGDNEDQSTTPTQPNNNHSNNLLPPWMVRPIMNE 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60485g00005 199 MobiDBLite consensus disorder prediction 168 188 - -
Stsc60485g00005 199 MobiDBLite consensus disorder prediction 1 20 - -
Stsc60485g00005 199 Pfam K-box region 51 112 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc60485g00005 199 Coils Coil 62 85 - -
Stsc60485g00005 199 ProSiteProfiles K-box domain profile. 28 118 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc60485g00005 199 Coils Coil 91 121 - -
Stsc60485g00005 199 MobiDBLite consensus disorder prediction 1 16 - -
Stsc60485g00005 199 MobiDBLite consensus disorder prediction 138 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60485g00005 Stsc-Chr60485 19203 26468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60485g00005 51 195 MADS-box Gene Family AT5G60910 50.993 2.02e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60485g00005 K09264 - gmx:100784742 128.642