Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60484g00023 ATGGGAATGGAGCTAAGAAGTTGGGTTTGGATGAGTGGTGCGACACTGTTGGCATGTTACTTTGTTGTAAACATATTTGGGAGAAGAGTGAATGAATGGTATTATGATTTCAAGCTGGGACGCAAGCATCGTTTGCTGCCTCCTGGTGACATGGGTTGGCCTCTTATTGGCAAAACCTGGTTCTTTATCAAACACTTGAGATCTGGAAATGCCCACCCTGATTTATTCCTCAATGATCTTGTTTCCAGATATGGAAAAGCTGGAATGTACAAAACACACTTATTCATGAATCCTGGAATAGTTGTGTACACCTTAGAGGCATGCAGAAAAGTGTTGAGTGATGACAACAAATTTAAGCTAGGTTATCCCCAAACCACTTTAACGGTGACCCAGTCACCGTTGTATGATGTGTCCGGCGAAGAACACAAGCGTTTCCGGCGACTGGTCACTGCCCCCATTATGGGTTACAATGCTTTAGCCAAGTTTCTAGATAGAATGGAGGACACTGTGATTGAATCACTGGAAGGAATGGCGAGGAGAAGCATGAAACAACCTGTTATGGCGTTCAAGGAGACCATGGCTCTCTCCTTAAGAGTCATCGTTCACATTTTCATTGGATCTTACCATCACCGCAATACAATCAAACAAATTGAAGATCTGTTTCGTCCCGTTGATGATGCCTTGTTCTCTTGGCCAATTAATTTTCCCGGTTTTACTTATCATAAAGCACTTAAGAATCGTAAGAAGGTGGAAGAAATAGTTCAATCCATAGTGGAGGAAAGGAAGTTGATGATAAAAAATGGCAATGAAGTAAGAGAGAAGAAAGATCTAGTGGATATTCTTCTGGAAGTGGAGGACGTGAATGGTAGAAAATTGAAGGGTGAAGACATTGTTAACATGTTGGTATTGTTCTTATTGGCTGGTCATGTAAGTACAGCAACGGTTATGATGTGGTCAATGATATATCTCACAAAGAACCCACTCGTCTTCAACAAAGCCAAGGAAGAACAAAAAGAGATTTTGAAATCAAGGCCACCTTCCCAAAAGCATTTAAGCATTGAAGAAATTAAGAGAATGATTTACCTTACTAAGGTAGTTAATGAAGTGATACGCGCAACAGAGTGGGCAGTTCCCATTTTTCGACAAACAACTACCGATGTGGATATCAATGGTTATATCATACCTAAAGGATGGAGAGTATTTATTTGGCAGAGAGGTTGTCATCAATCTTCTGAATATTTTCCAAATCCGGAAGAATTTAATCCTTCTAGATGGGATAGTGATGATTTTACAAAAGGAGGAGCCTTCTTTCCTTTCGGAGTTGGAACAAGAATGTGTCCTGGAAGAGATCTTACCAAAATTGAAATGCTCATCTTTCTGCATCATTTCGTCCTTAATTATAAGTTTGAACAAATAAATCCAGAATGCCCTGTCTCTTACGTGCCAGTACCCGTGCCTAAAGATCATTGTCTTGCCAAGGTAATAAAGGTCTCCACGGAATAG 1503 0.4039 MGMELRSWVWMSGATLLACYFVVNIFGRRVNEWYYDFKLGRKHRLLPPGDMGWPLIGKTWFFIKHLRSGNAHPDLFLNDLVSRYGKAGMYKTHLFMNPGIVVYTLEACRKVLSDDNKFKLGYPQTTLTVTQSPLYDVSGEEHKRFRRLVTAPIMGYNALAKFLDRMEDTVIESLEGMARRSMKQPVMAFKETMALSLRVIVHIFIGSYHHRNTIKQIEDLFRPVDDALFSWPINFPGFTYHKALKNRKKVEEIVQSIVEERKLMIKNGNEVREKKDLVDILLEVEDVNGRKLKGEDIVNMLVLFLLAGHVSTATVMMWSMIYLTKNPLVFNKAKEEQKEILKSRPPSQKHLSIEEIKRMIYLTKVVNEVIRATEWAVPIFRQTTTDVDINGYIIPKGWRVFIWQRGCHQSSEYFPNPEEFNPSRWDSDDFTKGGAFFPFGVGTRMCPGRDLTKIEMLIFLHHFVLNYKFEQINPECPVSYVPVPVPKDHCLAKVIKVSTE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60484g00023 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Stsc60484g00023 500 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Stsc60484g00023 500 SUPERFAMILY Cytochrome P450 40 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00023 500 PANTHER CYTOCHROME P450 26 43 486 - -
Stsc60484g00023 500 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00023 500 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00023 500 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00023 500 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00023 500 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00023 500 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00023 500 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00023 500 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00023 500 Gene3D Cytochrome P450 39 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00023 500 Pfam Cytochrome P450 48 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60484g00023 Stsc-Chr60484 130047 139032 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60484g00023 4 494 Cytochrome P450 AT1G05160 41.700 6.49e-144 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60484g00023 K04123 - adu:107492701 683.715