Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60484g00021 ATGGAAGTGATCCTTTGGCCTTTGGCTTGTTATAAGGATCCCCAATATTTTCCAAATCCAAAAGAGTTTAATCCTTCGAGATGGGATGATAATAATGCAAAAGAAGCATTCCTTCCATTTGGAGCTGGAATTAGGCAATGCCCTGGAAGAGATATCGCAAGAGTTGAAATACTTATTTTTCTACATCATTTCGTTCTTAATTATAAGTTGGAGCAGATCAATCCAGAATTCCCAATCTCATATTTGCCCGTTCCAGTGCCTAAAGATAACTGTCTTGCCAAGCTCATAAAGGTTTCAAGTGGAATAGCTGCTTAG 315 0.3841 MEVILWPLACYKDPQYFPNPKEFNPSRWDDNNAKEAFLPFGAGIRQCPGRDIARVEILIFLHHFVLNYKLEQINPEFPISYLPVPVPKDNCLAKLIKVSSGIAA 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60484g00021 104 Gene3D Cytochrome P450 1 99 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00021 104 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 40 49 IPR017972 GO:0005506|GO:0016705
Stsc60484g00021 104 PRINTS E-class P450 group I signature 6 30 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00021 104 PRINTS E-class P450 group I signature 37 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00021 104 PRINTS E-class P450 group I signature 47 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00021 104 Pfam Cytochrome P450 2 72 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00021 104 SUPERFAMILY Cytochrome P450 3 96 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60484g00021 104 PANTHER CYTOCHROME P450 26 3 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60484g00021 Stsc-Chr60484 122419 122961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60484g00021 2 95 Cytochrome P450 AT1G05160 50.000 1.82e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60484g00021 K04123 - aip:107647938 146.747