Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60484g00017 ATGCCTTACCTTGTCCGCGACAATCTCTTCATCGGGAACATCAGCGACGCCGCCGAAATCCTCCAGAACGGTGGAGCTGCCGCTGCTGCCGGAGGTGGAGACTTCACTCACATCCTCTCCGTCCTCAGCTCCGCCTCCATTTCCTTCTTCTCCGAATGGCGCCCTTCAATCTCCATCCCCGTAATAGAGATCAGCAAGGTCTACGTCTCCGGCGCCGGCAGCGGTGACTCCGGCAAGTGTGCCCTGCCGCCGGAGAAGCTCCTTTACTCGCTCGAGTACGCCGGACGTGACCTCAAGCTGGTGAGGATGGCGGTGCCTCTGAAGGACACAGAGAACGAGGACTTGCTTGACTACCTCGAAGTTTGCATCGACTTCATTGATCGTAGCAGGAAGGAAGGTTCCGTTTTAGTTCACTGCTTCGCCGGAGTTTCTAGAAGGTTCCACCTCTCTTCCTTTCTGTTGTTGAATGTTCTTACGTAA 480 0.5563 MPYLVRDNLFIGNISDAAEILQNGGAAAAAGGGDFTHILSVLSSASISFFSEWRPSISIPVIEISKVYVSGAGSGDSGKCALPPEKLLYSLEYAGRDLKLVRMAVPLKDTENEDLLDYLEVCIDFIDRSRKEGSVLVHCFAGVSRRFHLSSFLLLNVLT 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60484g00017 159 Gene3D Protein tyrosine phosphatase superfamily 2 151 IPR029021 -
Stsc60484g00017 159 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 159 IPR000387 GO:0016311|GO:0016791
Stsc60484g00017 159 Pfam Dual specificity phosphatase, catalytic domain 101 145 IPR000340 GO:0008138|GO:0016311
Stsc60484g00017 159 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 146 - -
Stsc60484g00017 159 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 100 145 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60484g00017 Stsc-Chr60484 105379 106042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60484g00017 100 146 Protein tyrosine phosphatase (PTP) family AT3G23610 47.917 2.15e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60484g00017 K14819 - qsa:O6P43_006353 192.971