Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60484g00006 ATGGCATCAATGTCAGCCTCGGGTTCATGGAGTGCCAAGGACAACAAGGCCTTTGAGAGGGCACTCGCTGTCTACGACAAGGACACTCCTGACCGTTGGTACAACGTCGCCAACGCCGTTGGCGGCGGCAAGACCCCCGAAGATGTCAAGAGCCACTACGAGCTTCTTGTTCGAGATGTTAACTTCATTGAATCAGGCCAAGTTCCATTTCCATACAAGAAAAATAATAATCCAACCTCTACTGAAGAAGATCACAACAGGCTTAAGAATCTGAAGCTAAATTAA 285 0.4772 MASMSASGSWSAKDNKAFERALAVYDKDTPDRWYNVANAVGGGKTPEDVKSHYELLVRDVNFIESGQVPFPYKKNNNPTSTEEDHNRLKNLKLN 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60484g00006 94 CDD SANT 9 57 IPR001005 -
Stsc60484g00006 94 ProSiteProfiles SANT domain profile. 5 61 IPR017884 -
Stsc60484g00006 94 Gene3D - 2 70 - -
Stsc60484g00006 94 SUPERFAMILY Homeodomain-like 8 65 IPR009057 -
Stsc60484g00006 94 MobiDBLite consensus disorder prediction 69 94 - -
Stsc60484g00006 94 SMART sant 6 59 IPR001005 -
Stsc60484g00006 94 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 82 IPR044636 GO:0003700
Stsc60484g00006 94 MobiDBLite consensus disorder prediction 78 94 - -
Stsc60484g00006 94 FunFam Transcription factor SRM1 2 70 - -
Stsc60484g00006 94 Pfam Myb-like DNA-binding domain 8 53 IPR001005 -
Stsc60484g00006 94 ProSiteProfiles Myb-like domain profile. 8 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60484g00006 Stsc-Chr60484 34321 35590 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc60484g00006 Myb_DNA-binding 8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60484g00006 - - gmx:100804396 144.05