Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60484g00006 | ATGGCATCAATGTCAGCCTCGGGTTCATGGAGTGCCAAGGACAACAAGGCCTTTGAGAGGGCACTCGCTGTCTACGACAAGGACACTCCTGACCGTTGGTACAACGTCGCCAACGCCGTTGGCGGCGGCAAGACCCCCGAAGATGTCAAGAGCCACTACGAGCTTCTTGTTCGAGATGTTAACTTCATTGAATCAGGCCAAGTTCCATTTCCATACAAGAAAAATAATAATCCAACCTCTACTGAAGAAGATCACAACAGGCTTAAGAATCTGAAGCTAAATTAA | 285 | 0.4772 | MASMSASGSWSAKDNKAFERALAVYDKDTPDRWYNVANAVGGGKTPEDVKSHYELLVRDVNFIESGQVPFPYKKNNNPTSTEEDHNRLKNLKLN | 94 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60484g00006 | 94 | CDD | SANT | 9 | 57 | IPR001005 | - | |
Stsc60484g00006 | 94 | ProSiteProfiles | SANT domain profile. | 5 | 61 | IPR017884 | - | |
Stsc60484g00006 | 94 | Gene3D | - | 2 | 70 | - | - | |
Stsc60484g00006 | 94 | SUPERFAMILY | Homeodomain-like | 8 | 65 | IPR009057 | - | |
Stsc60484g00006 | 94 | MobiDBLite | consensus disorder prediction | 69 | 94 | - | - | |
Stsc60484g00006 | 94 | SMART | sant | 6 | 59 | IPR001005 | - | |
Stsc60484g00006 | 94 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 3 | 82 | IPR044636 | GO:0003700 | |
Stsc60484g00006 | 94 | MobiDBLite | consensus disorder prediction | 78 | 94 | - | - | |
Stsc60484g00006 | 94 | FunFam | Transcription factor SRM1 | 2 | 70 | - | - | |
Stsc60484g00006 | 94 | Pfam | Myb-like DNA-binding domain | 8 | 53 | IPR001005 | - | |
Stsc60484g00006 | 94 | ProSiteProfiles | Myb-like domain profile. | 8 | 57 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60484g00006 | Stsc-Chr60484 | 34321 | 35590 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Stsc60484g00006 | Myb_DNA-binding | 8e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60484g00006 | - | - | gmx:100804396 | 144.05 |