Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60483g00023 ATGAAAAGCAAAGACAATAATATTAATGTTAATCTGCCTCCATCACCAAGAAAGTTACCTATAATTGGGAATCTTCATCAGATAGGAGCATTGCCATATCGTTCCTTCAAAGCCTTATCAGACAAGCACGGTGATGTGATGTTCTTACAGTTGGGTCACATTCCAACAGTGGTGGTTTCATCAGCACAAGTGGTGAACGAAATCATGTCGAAAGGCCACGACTTAGCACTCTCGAACCGAGCCCAAACCACAGCCACAAACACCTTGCTGTACGGATCCAATGACATTGGTTTTGCAAATTACGGAGAAAGTTGGAAGCAGAAAAGAAAGATATGCATGCGTGAGCTCTTGAGTCCTAAGATGGTTGAGTCAGAATCGATTCGTTTGGTTAGAGAAGGTGCAGTTACAGAACTGGTTGACAAGGTACGAGAAGCTGCAGGATCATGTTCTTCAGTGAATTTGAGTGAGTTGATCGTTGAAGCAGCTAACAACATCATTTGTAACTCTGTTCTTGGACTAAAGAACGACGCGAAAGGTGTTCGACGCAAAGACAGCGTGAAGGAGCTGGCAAAGAAGGTGATGTTTCAGGTTGGAGTTGTCACCATTGGGGATTACTTTCCATGGTTGAGTTGGGTTGATGTTGTGACTGGCCAGCTTCAACAATACAAGAACACTTTTCAAGCCTTGGATCCCTTGTTTGATGAGATCATTGCTGAGCGAAGGAGTTCCATCATCAACAGAAGAGCTCATGATGATCAAAGAGATTTTGTGGACATCCTCATCCAATTTCAACAACAACAGCAGCCTGCCAATAATAATAATGCATTTTCCAACATTGACATCAAATCAATTCTCCTGGACATGTTCGTAGCGGGAAGTGAGACAACTTCAGTAACAGTAGAATGGGCAATGTCAGAGCTGATGAAGAATCCAATAGAACTGAAAAAAGTGCAGGAAGAGGTGAGAAGAGTTGTAGGGAAGAAATCAAATGTGGAAGAGAGCAAGGTGAAGCAAATGGAGTATTTAAAATGTGTGGTGAAGGAGACTCTAAGGTTGCATCCACCTGCACCTCTCTTGGGTCCAAGAGTGGCAAGAAGCCATGTGAAACTCAAAGCATACGACATTCCAGCAAAGACAAGATTGTATGTGAACGCATGGGCAATCCAGAGGGACCCTCAAGTGTGGGACAACCCGGAAGAGTTCATTCCAGAGAGGCATAGCCATAGTCACACCAACACTCAAGACTTTAAGCTTATTCCATTTGGTTTTGGCAGAAGAGGGTGCCCTGGAATCAATTTTGGCCTTGCTTCTGTTGAGTATATGCTTGCTAATCTTCTCTATTACTTCAACTGGGAATCTCCACAAGCACAAGACATAGATATGAGTGAGATATTTGGCCTTGCTGCCTACAAAAGAATCCCTCTTCATCTTAAGCCTATTCCATTCTCATTCGAATAA 1458 0.4307 MKSKDNNINVNLPPSPRKLPIIGNLHQIGALPYRSFKALSDKHGDVMFLQLGHIPTVVVSSAQVVNEIMSKGHDLALSNRAQTTATNTLLYGSNDIGFANYGESWKQKRKICMRELLSPKMVESESIRLVREGAVTELVDKVREAAGSCSSVNLSELIVEAANNIICNSVLGLKNDAKGVRRKDSVKELAKKVMFQVGVVTIGDYFPWLSWVDVVTGQLQQYKNTFQALDPLFDEIIAERRSSIINRRAHDDQRDFVDILIQFQQQQQPANNNNAFSNIDIKSILLDMFVAGSETTSVTVEWAMSELMKNPIELKKVQEEVRRVVGKKSNVEESKVKQMEYLKCVVKETLRLHPPAPLLGPRVARSHVKLKAYDIPAKTRLYVNAWAIQRDPQVWDNPEEFIPERHSHSHTNTQDFKLIPFGFGRRGCPGINFGLASVEYMLANLLYYFNWESPQAQDIDMSEIFGLAAYKRIPLHLKPIPFSFE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60483g00023 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Stsc60483g00023 485 Gene3D Cytochrome P450 2 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 Pfam Cytochrome P450 13 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 CDD CYP71-like 42 475 - -
Stsc60483g00023 485 PRINTS E-class P450 group I signature 40 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PRINTS E-class P450 group I signature 161 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 FunFam Cytochrome P450 83B1 1 478 - -
Stsc60483g00023 485 SUPERFAMILY Cytochrome P450 13 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60483g00023 485 PANTHER CYTOCHROME P450 71B11-RELATED 7 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60483g00023 Stsc-Chr60483 99939 101656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60483g00023 13 479 Cytochrome P450 AT3G26330 40.381 3.32e-119 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60483g00023 K20617 - gmx:100785621 567