Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60483g00010 ATGTCTTCAAACAGGAAATTAGGAAGGGCACCCATAACTGCAAAGGGATTAGACTATGATTACTATTGGATATCATGCCCTAGGCTTGAAAGAATTGTGAGGAAGCATCTTGAAGATGTCTTTGCCAAGGACCCTGGCCAAGCCCCTGGCATTCTTCGTCTCTTCTTCCATGATTGCTTTTCTCAGGGATGCGATGCTTCAATATTGCTGGACGGTGCAAACGATGAACAAACAGCAGATGAAAACATAGGGTTAAGGCCAGAAGCCATTCAAACCATTGAAAATCTTAGAGCTCTTGTCCGCAAGCAGTGCCCTAGGGTTGTCTCTTGCTCTGACATCCTTGTCATCGCTGCTCGCGAAGCTGTTCGTCAGTTTGGAGGCCCTGATTTTGATGTGCCATTGGGAAGAAAAGACAGCAAATCCTTCAACACATCGGCAGCCACAAACCTCCCAAAACCTTTCTTTAAAACTCCAGATCTTCTTAAATCTTTCACGGATAAAAAACTCGATGCCACGGATTTAGTTGCACTATCCGGCGCGCACACATACGGCGTAAGCCACTGCGGATCGGTCTTCGATTTCGAACAAATCATCCCCTTTAACCGGAGCACCGATGCGCCCATCGAGCCCCAGTTTAGTAACAGCCTCGTCGGGAAATGTCCCAACGAGGACAGTCCCGCCACGATTGACCTAGACATAAGGACACCAAACAAGTTCGACAACATGTACTACATTGATTTGTTGAACCAACAAGGGGTGTTTATCTCCGACCAGGATCTTGCTTATCATAAAGATACCAAGGAGATTGTGAACCAATTTGCTTCTAATCAGAAACTGTTCTTTGATAAGTTTGCTAATGCTTTTGTTAAGGCTTCACAGCTGGAAGTTCTTACTGGGAATGATAAGAGAGGTGAGATTCGTAAGAGTTGTTTTGCTCCTAATGATGGTGATGATGGGGTTTCTTCTTCTCTGCTCCATGAGGTTGTGGATTCGGCTACAGCATCTAATTAA 1011 0.452 MSSNRKLGRAPITAKGLDYDYYWISCPRLERIVRKHLEDVFAKDPGQAPGILRLFFHDCFSQGCDASILLDGANDEQTADENIGLRPEAIQTIENLRALVRKQCPRVVSCSDILVIAAREAVRQFGGPDFDVPLGRKDSKSFNTSAATNLPKPFFKTPDLLKSFTDKKLDATDLVALSGAHTYGVSHCGSVFDFEQIIPFNRSTDAPIEPQFSNSLVGKCPNEDSPATIDLDIRTPNKFDNMYYIDLLNQQGVFISDQDLAYHKDTKEIVNQFASNQKLFFDKFANAFVKASQLEVLTGNDKRGEIRKSCFAPNDGDDGVSSSLLHEVVDSATASN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60483g00010 336 ProSitePatterns Peroxidases active site signature. 48 59 IPR019794 GO:0004601
Stsc60483g00010 336 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Haem peroxidase superfamily signature 48 62 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 Pfam Peroxidase 33 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 ProSiteProfiles Plant heme peroxidase family profile. 16 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 SUPERFAMILY Heme-dependent peroxidases 16 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 Gene3D - 20 310 - -
Stsc60483g00010 336 PRINTS Plant peroxidase signature 246 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Plant peroxidase signature 286 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Plant peroxidase signature 26 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Plant peroxidase signature 50 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Plant peroxidase signature 107 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 PRINTS Plant peroxidase signature 230 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 173 183 IPR019793 -
Stsc60483g00010 336 Gene3D Peroxidase, domain 2 152 292 - -
Stsc60483g00010 336 FunFam Peroxidase 151 291 - -
Stsc60483g00010 336 PANTHER - 14 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc60483g00010 336 FunFam Peroxidase 20 157 - -
Stsc60483g00010 336 CDD secretory_peroxidase 16 312 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60483g00010 Stsc-Chr60483 39929 42137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60483g00010 10 314 Peroxidase AT1G71695 50.000 4.06e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60483g00010 K00430 - gmx:100795412 395.201