Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60482g00008 ATGTCATCATCATTACCAACGCTTATTCAATCATCGTCATTCTTCATTTCCTTGATAGTTCTCCACCTTTCGTTCCCCTGCAGAGGCGATGTTGGAACTGCTGCTAGTTACTCCGCTCCATACTTACCTACGGCATGTTATGGGACGGAAGCGACAGAGTTCCCTTCGAGCAATCTGTTTGCGGCGGCGGGAGATGGAATATGGGACAATGGAGCAGCTTGCGGTAGGCAGTATCTGGTGAGGTGCATCAGTGCGGACCAACCAAGGACTTGCATTCCAGACCAAAGCATTCAGATCAAGATCGTTGATTACGCTCCCACCGCCACTACCTTGGTCTTGTCGGACAAGGCATTCGGGAGCCTTGCCAATACAAGTGCCGCCTTAATCAACATAGAATTTCAACAGGTGTGA 411 0.4964 MSSSLPTLIQSSSFFISLIVLHLSFPCRGDVGTAASYSAPYLPTACYGTEATEFPSSNLFAAAGDGIWDNGAACGRQYLVRCISADQPRTCIPDQSIQIKIVDYAPTATTLVLSDKAFGSLANTSAALINIEFQQV 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60482g00008 136 CDD DPBB_EG45-like 30 134 - -
Stsc60482g00008 136 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 32 136 IPR007112 -
Stsc60482g00008 136 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 12 135 - -
Stsc60482g00008 136 Pfam Lytic transglycolase 66 132 IPR009009 -
Stsc60482g00008 136 SUPERFAMILY Barwin-like endoglucanases 18 136 IPR036908 -
Stsc60482g00008 136 Gene3D - 30 136 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60482g00008 Stsc-Chr60482 86373 87487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60482g00008 45 136 Expansin Gene Family AT3G45970 33.981 8.32e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60482g00008 - - gsj:114411714 197.978