Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60481g00018 ATGCATCTCACAGCCACCCTTCGTCGATGCCCTGCCCCACCAAAACTTACTCTCAATCTCTCTCTCTCCATCGCGTCGCTGTCGCCAGAGCCTCGGCGTCGCCGCGTCCAGAACGTTGCCGCCGCCGCAAGTCCAGAATGTGCACTCGTCATTCACGGCGTCGACCACTCCTTCTCGCCGCGTTCAAAGCCTTGTCGTCTCCTTCTGCGGTCGCAGTTCCAGCCGGGCCTCCATAGAGGAAAAGAAGACTCTTTAGATCCAAATAAGGTGAAGGGAAAGCTTGTTTACTCCAAATTAGGAACATATGGCACTGAAGCAATTGTGAAAGCAATTGGAGGCATTGGTGCCATAATTGAAAGACAGAAATATCATGATGTTGCTCAAGTTTTCATGGCTCCTTCCACCATTGTGAATAATAGCTCAGTGATGTATAGGGCATATGAAATTAAAAAGCCAGCTCCATTTGTTGCTACCTTCTCATCTAGAGGTCCAAATCCAAGGTCTCAACATATTCTTAAGCCTGATATTGCAACACCAGACATTGATATCTTGACATTGTACACATTTGGGAGGTCAATCACTGGCTTGAAAGGGACACTCAATTCTCAAAATTTATTTACTCTATTTTCTGGAACTTCCATGGCCTGTCCTCATGTTGCTGGAGTAGTAGCATATATGTTATGTCATCTCATCCATATTGGACTCCTTATGCAATTAGATCTGCCATTATTACCACAGCCAAAACCAGTGAGCAAGAAAATCAACATTGAAGCATAA 777 0.453 MHLTATLRRCPAPPKLTLNLSLSIASLSPEPRRRRVQNVAAAASPECALVIHGVDHSFSPRSKPCRLLLRSQFQPGLHRGKEDSLDPNKVKGKLVYSKLGTYGTEAIVKAIGGIGAIIERQKYHDVAQVFMAPSTIVNNSSVMYRAYEIKKPAPFVATFSSRGPNPRSQHILKPDIATPDIDILTLYTFGRSITGLKGTLNSQNLFTLFSGTSMACPHVAGVVAYMLCHLIHIGLLMQLDLPLLPQPKPVSKKINIEA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60481g00018 258 ProSitePatterns Serine proteases, subtilase family, serine active site. 211 221 IPR023828 -
Stsc60481g00018 258 Pfam Subtilase family 152 227 IPR000209 GO:0006508|GO:0008236
Stsc60481g00018 258 Gene3D Peptidase S8/S53 domain 150 226 IPR036852 GO:0004252|GO:0006508
Stsc60481g00018 258 Gene3D - 81 149 - -
Stsc60481g00018 258 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 81 226 IPR045051 -
Stsc60481g00018 258 SUPERFAMILY Subtilisin-like 107 228 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60481g00018 Stsc-Chr60481 143829 145866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60481g00018 83 226 Subtilisin-like Serine Gene Family AT4G00230 51.250 1.07e-43 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60481g00018 - - qsa:O6P43_017530 180.259