Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60477g00032 ATGCAGTCTCCTCCATCAGGAATCTCAGTAACCTCAACTGCTATAAACAGCTTCAAAATCCAGCCATTCACTATTATTAGTCTCAAGAACAAGAAACCAACCTCTTTTCCATCTCATCATGTTTCACCTTCCTCTTATCAATTATTCCCTCCTTTCTCTCTCTCCAAATCAGGACTATGCAGGGCAAGTGAAGTTGTTGATCTGTTCCCAGCATTGTGTTCTCAAGTTAGAATCCGGGAGGCAAGGGTGATGGACTATTGGGAAGTGGCAGAGACTCATTGCAGCTGCTTCTTCCCTGAATATTCCTTCCCTTTGGATTTTCTGATCAGGATTGATAGATTGTTGCTGGCTATGTTAGCATCTATCTTAACAGCCTTGGTTCGGCCAAGAGCTTGCAAACGAATCTGTTTGGTTGCTGTTATTGGTAATGGCAGTGGCAGTGGCACCTCACTTCATCAAACTCTTTCTTCCTTTCCAAGCATCCTCAACAAGGAATATGTGGCTGGTATATTAACACTGGACAATTTCGCAGACTATCTACCACGAAAGGGGCCGCGCCGTTGGAGAAGGACTGAAATTGCATACATATCAAATGTGGCAGTAAGAGAGAACTTGAGAGGGAAAGGAATAGCTAAGAAATTGATTGGAAAGGCAGAATCAATGGCCAGAAGTTGGGGATGCCGTGCAGTTGCATTGCACTGTGATTTGAACAATTCTATGGCCACAAAGTTATACAAAGGTCAAGGCTATAAATGTGTCAAAGTTCCAAAAGGAGCAAAGTGGCCTCAGCCAAGGTCCTCTCCTGATATCACCTTCAACTTCATGATGAAGCTTCTCAACAACTCACCTGCTTCTCATTAA 861 0.4344 MQSPPSGISVTSTAINSFKIQPFTIISLKNKKPTSFPSHHVSPSSYQLFPPFSLSKSGLCRASEVVDLFPALCSQVRIREARVMDYWEVAETHCSCFFPEYSFPLDFLIRIDRLLLAMLASILTALVRPRACKRICLVAVIGNGSGSGTSLHQTLSSFPSILNKEYVAGILTLDNFADYLPRKGPRRWRRTEIAYISNVAVRENLRGKGIAKKLIGKAESMARSWGCRAVALHCDLNNSMATKLYKGQGYKCVKVPKGAKWPQPRSSPDITFNFMMKLLNNSPASH 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60477g00032 286 Pfam Acetyltransferase (GNAT) family 167 250 IPR000182 GO:0016747
Stsc60477g00032 286 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 73 278 IPR016181 -
Stsc60477g00032 286 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 76 281 IPR000182 GO:0016747
Stsc60477g00032 286 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 283 - -
Stsc60477g00032 286 CDD NAT_SF 186 233 - -
Stsc60477g00032 286 Gene3D - 71 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60477g00032 Stsc-Chr60477 143903 145070 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc60477g00032 Acetyltransf_1 2e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60477g00032 - - gmx:100803930 337.035