Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60477g00018 ATGGCCTCCCCGCCAAACAAAGACAAAACCATTAATGGTAGTGGCGCCACCAATTCCCTTCACGTGGAATCCGGCTCCCCACCGCAGACGGCCCCACTCTGGAAGCTCATAGCGGTGGCCTCCATCGCCGCCGGAATCCAGTTTGGCTGGGCTTTACAGCTCTCACTCCTAACACCCTACAGTCAGCTTCTCGGAGTACCACACACATGGTCCTCTTTCATCTGGCTCTGCGGCCCCATTTCCGGCATGGTTGTCCAGCCTATCGTCGGTTACTACAGCGACCGCTGTACCTCCAAACTCGGACGTCGCCGTCCCTTCATCCTCGGCGGTGCCGTTGCCGTCGCCATAGCTGTTTTCCTCATTGGCTTCGCCGCCGACATCGGCCACGCCATTGGAGACGACCTCTCCAAGAAAACACGGCCGCGCGCCGTCGCCATCTTCGTGATCGGATTCTGGATCTTGGACGTGGCGAACAACATGCTCCAAGGCCCATGCCGAGCGTTCCTTGGCGACCTTGCCGCCGGCGACGACAAGAGAACTCGACTGGGAAACGCGTTCTTCTCATTCTTCATGGCAGTGGGAAGCGTGGCGGGTTACGGCGCGGGTTCGTATGACAAAATCCACAAAGTGTTCCCATTCACAGTAACAAAAGCGTGTGACAGATTCTGCGCAAACCTGAAAACGTGCTTCTTCTTCTCCATCCTGCTTCTCCTGATCTTGACGGCCGTGGCTCTCTTCTACGTTAAGGACGAGCAAGTGACACGTGAGAAGTCAGAGGAGGACGAGAGATCGGCAGCAGTGGCATGCTTCGGTGATATGTTAGGGGCCCTCAAGGGCCTGAAGAAGCCCATGTGGTTGCTGATGGCTGTTACGGCAATCAACTGGTCAGCGTGGTTCTCATACTTCTTGTACAACACTGATTGGATGGGGAAGGAGGTGTACGGTGGGAAGGTTGGGGATGATGCCTACAGTAGAGGTGTGGAGAAGGGAGCAATGGGTCTTTTGATCAACTCAGTTGTTTTAGGTGCTATGTCTTTGGCTGTGGAGCCCATTGGGCGTGCGGTTGGTGGCGCCAAGAACCTTTGGGGATTTGTCAATTTTATCCTCGCCGGTGGCTTGGGCATGACTCTTTACATCTCCAAGGTAGCTAAGCACGACCGACTTATTAACCCCCGCTTCGTTGGTCATCCCTCCGCCGGCGTCAAGGCTGGTGCCTTGAGCTTCTTCGCCGTTCTCGGCATTCCACTTGCGATAACGTACAGTGTCCCGTTTGCACTAGCATCCATCTACTCGAGCGACACTGGTGCAGGACAAGGTTTGTCTCTGGGAGTTCTCAATCTTGCGATTGTGATTCCACAAATGATAGTGGCAGCACTGAGCGGGCCATGGGACAATGTATTTGATGGTGGGAACTTGCCGGCCTTCGCGGTAGGTGCGGTGGCGGCCGCCCTTAGTGGCATAATGGCAATTTTCTTGCTGCCTTCGACCAAGCAATCAGAAGCGGCTAAAGCTTCTCTCGCCATCGGTGGATTCCATTAG 1539 0.5523 MASPPNKDKTINGSGATNSLHVESGSPPQTAPLWKLIAVASIAAGIQFGWALQLSLLTPYSQLLGVPHTWSSFIWLCGPISGMVVQPIVGYYSDRCTSKLGRRRPFILGGAVAVAIAVFLIGFAADIGHAIGDDLSKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDDKRTRLGNAFFSFFMAVGSVAGYGAGSYDKIHKVFPFTVTKACDRFCANLKTCFFFSILLLLILTAVALFYVKDEQVTREKSEEDERSAAVACFGDMLGALKGLKKPMWLLMAVTAINWSAWFSYFLYNTDWMGKEVYGGKVGDDAYSRGVEKGAMGLLINSVVLGAMSLAVEPIGRAVGGAKNLWGFVNFILAGGLGMTLYISKVAKHDRLINPRFVGHPSAGVKAGALSFFAVLGIPLAITYSVPFALASIYSSDTGAGQGLSLGVLNLAIVIPQMIVAALSGPWDNVFDGGNLPAFAVGAVAAALSGIMAIFLLPSTKQSEAAKASLAIGGFH 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60477g00018 512 CDD MFS_SLC45_SUC 36 491 - -
Stsc60477g00018 512 PANTHER SUGAR TRANSPORTER 31 492 - -
Stsc60477g00018 512 MobiDBLite consensus disorder prediction 1 26 - -
Stsc60477g00018 512 Gene3D MFS general substrate transporter like domains 31 492 IPR036259 -
Stsc60477g00018 512 MobiDBLite consensus disorder prediction 1 27 - -
Stsc60477g00018 512 NCBIfam sucrose/proton symporter 32 498 IPR005989 GO:0005886|GO:0008515|GO:0015770
Stsc60477g00018 512 FunFam Sucrose transporter SUC2 34 255 - -
Stsc60477g00018 512 Pfam MFS/sugar transport protein 40 299 - -
Stsc60477g00018 512 SUPERFAMILY MFS general substrate transporter 36 499 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60477g00018 Stsc-Chr60477 89774 92409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60477g00018 16 512 Sucrose Transporter Gene Family AT1G71890 61.858 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60477g00018 K15378 - gmx:100784153 686.797