Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60476g00014 | ATGTGTATTACAAAACCCCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCCCAGCAAGTTCTCCGTCATGTCAACGTCTCTCTCCACGATGGAAGTGCCCTCGTCCTGACTGGTGCAAACGGCTCCGGCAAGACCACCTTCCTTCGCATGCTAGCTGGATTTTCCCGGCCTTCCGCCGGTGAGATTCTTTGGAATGGACACAACATACAAGAGTCTGGAATCTTCCACCAGTACAAGCTCCAGCTCAACTGGCTCTCCCTCAAGGATGCAATCACTGATACTTTCACGGTTCTCGAAAATGTTCAGTGGTTTGAGGTTCTTGAAGGAAAGTACGGCAGGTCTTTGCCTGCGCTTGAGTTGATGGGGCTGGGCAGATTGGCCAAGGAGAAGCCAAGGATGCTATCCATGGGGCAGCGGAAAAGGGTGCAAATTGCAAGGTTGATCGCCCTCGATCGACCCATATGGTTGCTTGATGAGCCTTCCGTTGCGTTGGATGATGAAGGGGTTAAGTTACTTGAGTACGTTATCTCGGAACATCGGAAAAATGGAGGTATTGTGATTGTGGCTACTCATTTGCCTATCGAGATACCCGATTCCATGGTGTTGAGGCTTCCACCCAGGTTTCCAAGGAGGATGACTTTCTTTGATATGCTTGACCGTTCTGATATTATGTAA | 690 | 0.4928 | MCITKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGSALVLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHNIQESGIFHQYKLQLNWLSLKDAITDTFTVLENVQWFEVLEGKYGRSLPALELMGLGRLAKEKPRMLSMGQRKRVQIARLIALDRPIWLLDEPSVALDDEGVKLLEYVISEHRKNGGIVIVATHLPIEIPDSMVLRLPPRFPRRMTFFDMLDRSDIM | 229 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60476g00014 | 229 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 11 | 229 | IPR003439 | GO:0005524 | |
Stsc60476g00014 | 229 | SMART | AAA_5 | 35 | 223 | IPR003593 | GO:0016887 | |
Stsc60476g00014 | 229 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 9 | 198 | IPR027417 | - | |
Stsc60476g00014 | 229 | NCBIfam | heme ABC exporter ATP-binding protein CcmA | 13 | 208 | IPR005895 | GO:0017004|GO:0022857 | |
Stsc60476g00014 | 229 | PANTHER | ABC TRANSPORTER I FAMILY MEMBER 1 | 6 | 222 | IPR005895 | GO:0017004|GO:0022857 | |
Stsc60476g00014 | 229 | Pfam | ABC transporter | 26 | 166 | IPR003439 | GO:0005524 | |
Stsc60476g00014 | 229 | Gene3D | - | 8 | 208 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60476g00014 | Stsc-Chr60476 | 100825 | 103297 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60476g00014 | 24 | 197 | Calmodulin-binding Proteins | AT2G36910 | 23.936 | 3.41e-10 | 57.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60476g00014 | - | - | cpap:110815669 | 400.979 |