Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60476g00002 ATGGAACAGAAGATGTTTGGGAATTGCTNNNNNNNNNNGGGAAATAGAGTAAGATCTGTTGGATCCACCTGTGCTAATGAGCTCAGCAGCCGTTCTCATTGCTTGCTGCGAGTTACTGTTATGGGGGAGAATTTAGTTAATGGCCACAGAACAAGGAGCCACCTCTGGCTAGTAGACCTAGCTGGCAGTGAGCGTGTAGGGAAAACAGAAGCTGAAGGAGAAAGACTTAAGGAATCTCAATTCATAAATAAGTCTCTATCTGCTCTTGGTGACGTTATTTCGGCTCTTGCCTCCAAATCTGCACATATCCCCTACAGGAACTCAAAGCTTACTCATATACTTCAGAGCTCCTTAGGAGGAGATTGCAAAACGTTAATGTTTGTCCAGGTTAGCCCAAGTGAGACAGATTTGGGAGAGACACTTTGTTCTCTAAATTTTGCTAGCCGGGTCCGTGGAGTTGAGAGTGGCCCAGCTCGCAAGCAAGTGGACCATGCTGAGCTGCTTAAATATAAGCAAATGGTAGAGAAACTCAAACATGATGAGAAGGAAACTAAGAAGCTACAAGATAACAATGCAAACTTGCAGCTGAGACTTGCTTCAAGAGAACACCAATGTAAAACCCTTCAGGAAAAGATTAGGTGCCTTGAGAATCAGATAGCTGAAGAAAGAAAGACCAGACTAAAGCAAGAGAGTAGATCACTTGCTGCTGTTTCAGCACAAAATTCATCTTCAACATCAACTGCACCTGGTAGAACCAATGCAGATAAGAAGCCACCTCTGAATCCTTCAAAGATGAGGATGCCATTGAGAAGAATCTCCAATTTCATGCCTTCACGATCTCCTACAGCATCAAAGAGATACAACACTTCCATGAATAGTGGGAAGGAAAACACTGGCTCAACCACTACAAACAGAGAAGCCTACTCAAAACCAAGTAGGGCATCAATTGCAGGAGTTAGACCACCTGCAATACCAACAGGGAAGCTCCTTCAACCAAGAAGGCGCGTCTCCGTTGCCACAATCCGTCCAGAAACAACTTCTGACATCACAACTCCACTCCGAACTCAGGCGCCACTGACAGCGCAGTTGCTTCAACCAAGAAGGCGGGTCTCCAGTGTCATAATCCGTCCAGAGACAACTTCTGAAATTACAACTCCACTCCGTGCATCTCAATTTGCAGGCGGAAGCAGTGTATTAATGAGTCGCCAAAGGAGAGCTCGGTATTCAAATCTGTTTGCGCCATTACCAGAGACAAGAGCATCTGTTGATATGGCCACACCAATGTCTATTAGGAGTAGCAGCAAGTTTAGAGGAAGTCCAATACATCCAGCTGCGGTTGCACTGCAACGGAAACCTGTGGTCTGGAGCCCTCTCAAACTGAGAAGCTTGAAAAATAACAATAACAGAAGGTCTTTGCTCTTGCCATCTCGGTCATACAATGAGTTGCAATGA 1452 0.449 MEQKMFGNCXXXXGNRVRSVGSTCANELSSRSHCLLRVTVMGENLVNGHRTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQVSPSETDLGETLCSLNFASRVRGVESGPARKQVDHAELLKYKQMVEKLKHDEKETKKLQDNNANLQLRLASREHQCKTLQEKIRCLENQIAEERKTRLKQESRSLAAVSAQNSSSTSTAPGRTNADKKPPLNPSKMRMPLRRISNFMPSRSPTASKRYNTSMNSGKENTGSTTTNREAYSKPSRASIAGVRPPAIPTGKLLQPRRRVSVATIRPETTSDITTPLRTQAPLTAQLLQPRRRVSSVIIRPETTSEITTPLRASQFAGGSSVLMSRQRRARYSNLFAPLPETRASVDMATPMSIRSSSKFRGSPIHPAAVALQRKPVVWSPLKLRSLKNNNNRRSLLLPSRSYNELQ 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60476g00002 483 ProSitePatterns Kinesin motor domain signature. 53 64 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc60476g00002 483 Coils Coil 170 232 - -
Stsc60476g00002 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 187 IPR027417 -
Stsc60476g00002 483 ProSiteProfiles Kinesin motor domain profile. 1 153 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60476g00002 483 MobiDBLite consensus disorder prediction 226 306 - -
Stsc60476g00002 483 PRINTS Kinesin heavy chain signature 54 72 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60476g00002 483 PRINTS Kinesin heavy chain signature 103 124 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60476g00002 483 PRINTS Kinesin heavy chain signature 23 40 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60476g00002 483 PANTHER KINESIN-LIKE PROTEIN KLP-3 13 285 IPR027640 GO:0003777|GO:0007018
Stsc60476g00002 483 Pfam Kinesin motor domain 13 152 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60476g00002 483 MobiDBLite consensus disorder prediction 231 252 - -
Stsc60476g00002 483 MobiDBLite consensus disorder prediction 275 306 - -
Stsc60476g00002 483 SMART kinesin_4 1 161 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60476g00002 483 Gene3D Kinesin motor domain 10 196 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60476g00002 Stsc-Chr60476 8331 11672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60476g00002 14 178 Calmodulin-binding Proteins AT5G65930 51.515 7.91e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60476g00002 K10406 - gmx:100788477 567.385