Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60474g00016 ATGTCGTCAAAATGCAGCAAGATTCGCCACATTGTGAGGCTTCGTCAGATGCTGCGTCGCTGGCGCATCAAGGCACGCATGTCTTCAGCTGCTAACCGCTCAAGCTCTTCTCCACCGTCCGATGTTCCCGCTGGACACGTGGCAGTCTGCGTGGGCGTCAACTGCACCAGATTCGTTGTGCGTGCTACTCATCTTAACCACCCTGTATTCCAGAAGCTTCTGGTTCAGGCGGAAGAAGAGTACGGCTTCGTCAACCACGGTCCTTTAGCCATTCCCTGCGACGAAGCACTCTTTGAAGATGTTATCCGGTTTATCTCCCGGTCTGAGTCAGGATCCGGTTCGAACCGGTTCTTGAATCTTGATGATTCTCAGAGGCACTGCCACGTGGGACTCAGGAACAGCCTTGAATTCTGGAAGCAGGAATCTCGACCGTTGCTTCATGGCTTCAATGACAAGACCATTTGGTAG 468 0.5278 MSSKCSKIRHIVRLRQMLRRWRIKARMSSAANRSSSSPPSDVPAGHVAVCVGVNCTRFVVRATHLNHPVFQKLLVQAEEEYGFVNHGPLAIPCDEALFEDVIRFISRSESGSGSNRFLNLDDSQRHCHVGLRNSLEFWKQESRPLLHGFNDKTIW 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60474g00016 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 101 IPR003676 GO:0009733
Stsc60474g00016 155 Pfam Auxin responsive protein 13 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60474g00016 Stsc-Chr60474 137223 137690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60474g00016 4 154 Calmodulin-binding Proteins AT4G34750 53.846 7.77e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60474g00016 K14488 - qsu:112012848 228.024