Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60474g00013 ATGGCTTTGAGAAAATCTACTAGGCTTCATCAAGCACCACTTCTCAAGCAAATTCTCAAGAGATGCTCAAGTTTAGGGAAGAAGCAAGGCTTTGATAATGATGTTCCAAAGGGTCACTTTGTTGTGTATGTTGGAGAGAATAGAAGCAGGTACATTGTCCCAATTTCAATTCTAAGGTGCCCTAGCTTCCAAACATTGCTTCATCAAGCTGAAGAAGAGTTTGGATTTGATCATGAAGGAGGCCTCACTATCCCTTGTGATGAGGATGTTTTTGAGTCTCTTCTTACATCATCAATTTAG 300 0.4 MALRKSTRLHQAPLLKQILKRCSSLGKKQGFDNDVPKGHFVVYVGENRSRYIVPISILRCPSFQTLLHQAEEEFGFDHEGGLTIPCDEDVFESLLTSSI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60474g00013 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 23 95 IPR003676 GO:0009733
Stsc60474g00013 99 Pfam Auxin responsive protein 22 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60474g00013 Stsc-Chr60474 77508 77807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60474g00013 14 96 Calmodulin-binding Proteins AT4G34750 45.783 1.42e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60474g00013 K14488 - pvy:116128449 150.599