Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60470g00015 ATGGCCACTTCATCGGTTGTGGATGAATTCGATGAATCCATGAAGAAACAGATATCATCCCTTTTGCGGGTTATGAGTTTAGTTAAATCCTTCAAAGAGGATAATACACCTTGCAAAATTGACGAGGGTCTCTTTTTGGGTTCCATTGGCACTGCTGCTAACAAGATTGCATTGAAAAGCTTGAATGTTACTCACATTTTGACTGTTGCTGGAAAACTGCCACCTACCAATCCTGGGGATTTTGTCTATAAAGTTATAGACGTTGCTGACAGGGATGACGTTGACTTGAAACAATACTTCAATCGGTGCTTTGATTTTATTGAGGAAGCCAAAATGCATGGTGGAGGTGTTTTGGTTCATTGTTTTGCAGGAAAATCAAGGAGTGTGACTGTGGTTGTTGCGTATCTGATGAAGACTCGTGGAATGAGCTTATCAGAAGCTTTGCAGCATGTGAAGAGCAGACGTCCACTGGCAGCTCCAAATCCTGGATTCATTCGTCAGCTGGAAGAATTTGAAAAATCACTTCAAGTTACAAATTGA 540 0.4111 MATSSVVDEFDESMKKQISSLLRVMSLVKSFKEDNTPCKIDEGLFLGSIGTAANKIALKSLNVTHILTVAGKLPPTNPGDFVYKVIDVADRDDVDLKQYFNRCFDFIEEAKMHGGGVLVHCFAGKSRSVTVVVAYLMKTRGMSLSEALQHVKSRRPLAAPNPGFIRQLEEFEKSLQVTN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60470g00015 179 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 34 176 IPR029021 -
Stsc60470g00015 179 FunFam Dual specificity phosphatase 12 38 179 - -
Stsc60470g00015 179 Pfam Dual specificity phosphatase, catalytic domain 44 173 IPR000340 GO:0008138|GO:0016311
Stsc60470g00015 179 SMART dsp_5 36 174 IPR020422 GO:0006470|GO:0008138
Stsc60470g00015 179 Gene3D Protein tyrosine phosphatase superfamily 28 179 IPR029021 -
Stsc60470g00015 179 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 97 156 IPR000387 GO:0016311|GO:0016791
Stsc60470g00015 179 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 177 IPR020422 GO:0006470|GO:0008138
Stsc60470g00015 179 CDD DSP 37 170 - -
Stsc60470g00015 179 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 34 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60470g00015 Stsc-Chr60470 44013 47120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60470g00015 39 176 Protein tyrosine phosphatase (PTP) family AT3G06110 60.870 1.08e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60470g00015 - - lang:109352945 281.182