Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60467g00001 | ATGGGCTTACAAAACCAGCTAAACGACGTGTCGTCTGGTTCGATTCCACTGCTGCTGATTGCGCACATAGCCACCTGCGTCAACTACCTCCGTTCCATGCTCTTCGCTCTTCTTCAAACCCTAGGTCTCTCACGGCTCCACACGCACCAGATCGTCGACGATGGATTCTTCGCCACCGTCGGATCCGGACTCGCCGGACTCATCATGCTCTCCGATCAGCTCGCCGCTAACAACCGATTCTTCTACAACTACGCCGTCGTCGACCGCGCCGACTCCGACGGCTGCGTCGTGTGCCAGAACAACTTCAAGGAAGGGGAACAGGTACGGATGCTGCCGTGCCGCCACGTCTTCCACCGCCACTGCTTCGACGGATGGCTCCATCACTACAAGTTCAACTGCCCCCTCTGTCGCTACCCGCTTCTCTCTGAAGAGCGCGTGGCCCTCACGGAGCGCCGCGTCGGTCGTGAACTCGTTTCGTGGTTCTCCCTTCGGTGA | 495 | 0.5899 | MGLQNQLNDVSSGSIPLLLIAHIATCVNYLRSMLFALLQTLGLSRLHTHQIVDDGFFATVGSGLAGLIMLSDQLAANNRFFYNYAVVDRADSDGCVVCQNNFKEGEQVRMLPCRHVFHRHCFDGWLHHYKFNCPLCRYPLLSEERVALTERRVGRELVSWFSLR | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60467g00001 | 164 | SUPERFAMILY | RING/U-box | 83 | 142 | - | - | |
Stsc60467g00001 | 164 | ProSiteProfiles | Zinc finger RING-type profile. | 95 | 137 | IPR001841 | - | |
Stsc60467g00001 | 164 | CDD | RING-H2_RHA2B | 93 | 139 | - | - | |
Stsc60467g00001 | 164 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 74 | 146 | IPR013083 | - | |
Stsc60467g00001 | 164 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 82 | 146 | - | - | |
Stsc60467g00001 | 164 | Pfam | Ring finger domain | 95 | 137 | IPR001841 | - | |
Stsc60467g00001 | 164 | SMART | ring_2 | 95 | 136 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60467g00001 | Stsc-Chr60467 | 19012 | 20213 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60467g00001 | 1 | 163 | C3H Transcription Factor Family | AT1G15100 | 49.693 | 6.10e-49 | 153 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60467g00001 | K16282 | - | gmx:100803789 | 255.373 |