Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60466g00015 ATGGAGGGACCTGTAGCTTGTGTCCTTAATTGCTACGACCCCTTGGATTCAAATGGCAACATTTCAGTCACTTTTGACATTTACCAACGCACAGATGATGACGGATATCTGGCAAGGGTGACAATTGAGAACTTCTATCAGTACCGGCATGTGGACAAACCAGGTTGGCAACTTGGATGGGAATGGGCTAACAATGAAGTTATATGGTCAATAAAGGGTGCAGTTGCAACAGATCAAGGCAACTGCTCTTCTTACACCAATCAGTTACCACATTCTTGCAAGAAAGACCCCCTCATAGTTGATCTCCCCTCAGATGTGTCCCCTGAGAGCAGATCAGAACACTGCTGCAACGACGGCGTCCTCTCCGCTCGCGCCATCAATCCTTCTACCTCGTTCTCCTCATTCGATCTTGAAGTACGCAGATTGGGGCAATACCCTCTTGGACAAGCTCCTAATAACCTCACACTCATGGCCCCTGGTCCTGGCTATACTTGTTCCCCTCTTCTTGAGGCTGATCCCACTATCATCTCATCTTTTGGTGGACAAAGACAAGTTCCTGCTCTCAGAACATGGAAGTCAGCATGTACATACTCGAATTTCATGGCGAGCGAGTCACCGGTATGCTGTGTATCCCTCTCAACATTTTACAACCCTGAGATCACACCATGCCCTGATTGCAGCTGTGGGTGCAGTGAAGCAGACAAAGCTTCCAAGTCTTGCATAAGGCTAGGTGATCCCTTATCAGGAGAGTCATCAAGAGAGGAGAACATAATGGCATGCACTAAGCACATGTGCCCAATTCGAGTTCATTGGCATGTTAAGAACAACTATGTAAATCACTGGAGGGTGAAACTTACCATTTCTAACTACTATTATACAAAAAACTACTCTAACTGGAATGTGCTGCTCCAACATCCTGGTTTCTCACATAATGCAACTTCTTACAGCTTCAACAGTGCCAAACTTCCCCTTCCCTTTCAAGATGGAGTTACTCTGTTTTGGGGAATCGATTATTACAACAACGAACTAGTGCATTCAGATAAGTATCAACAAGGTTTTGTGTCAACAGAGATACTATTAGAGAAAGATAGAAAATCTTTTACTTTGAGTAATGGATGGGCTTTTCCAAGGAGGATATACTTCAATGGCGAAAACTGTGAAATGCCATTGCCTGACACATTTCCTATGCTTCCAAATCATAGCAACACTTTGAGACCTACCTACTCTGGTGGTGGTTTCATTATTCTTTTTCTCATATCTTTATTCTGTTTCTGGAACAAAGGTTCCTTTGACTTTCAATTTTGA 1305 0.4368 MEGPVACVLNCYDPLDSNGNISVTFDIYQRTDDDGYLARVTIENFYQYRHVDKPGWQLGWEWANNEVIWSIKGAVATDQGNCSSYTNQLPHSCKKDPLIVDLPSDVSPESRSEHCCNDGVLSARAINPSTSFSSFDLEVRRLGQYPLGQAPNNLTLMAPGPGYTCSPLLEADPTIISSFGGQRQVPALRTWKSACTYSNFMASESPVCCVSLSTFYNPEITPCPDCSCGCSEADKASKSCIRLGDPLSGESSREENIMACTKHMCPIRVHWHVKNNYVNHWRVKLTISNYYYTKNYSNWNVLLQHPGFSHNATSYSFNSAKLPLPFQDGVTLFWGIDYYNNELVHSDKYQQGFVSTEILLEKDRKSFTLSNGWAFPRRIYFNGENCEMPLPDTFPMLPNHSNTLRPTYSGGGFIILFLISLFCFWNKGSFDFQF 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60466g00015 434 PIRSF COBRA 4 426 IPR006918 GO:0010215|GO:0016020
Stsc60466g00015 434 PANTHER PROTEIN COBRA 9 404 IPR006918 GO:0010215|GO:0016020
Stsc60466g00015 434 Pfam COBRA-like protein 36 198 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60466g00015 Stsc-Chr60466 71770 75029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60466g00015 12 421 COBRA Gene Family AT3G29810 46.747 6.16e-130 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60466g00015 - - ccaj:109801855 634.409