Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60465g00023 ATGGCTTCCAATGATGCTCAAGATCCACGATTACCGAGAATCTCCTCTGCGATCCGTGTTATCCCTGACTTCCCTAAGCCTGGTATTATGTTTCAGGACATAACCACGCTTCTGCTCGATACCAAGGCTTTCAAGGATACCATTGACTTGTTCGTTGAGAGGTACAGAGATCAGAACATTTCTGTTGTTGCAGGTGTTGAAGCAAGAGGATTTATATTTGGCCCACCTATTGCATTAGCTATTGGTGCAAAATTTGTCCCCATGAGGAAACCCAACAAGTTGCCAGGGGAGGTAATTTCAGAAGAGTATTCTCTTGAGTATGGAACTGACAAAATGGAGATGCATGTGGGAGCTGTACAAGCTGGAGATCGAGCCTTAGTCATAGATGATCTTATTGCCACTGGGGGAACCTTATGTGCTGCAATTAAGCTACTAGAACGTGTTGGGGCACAAGTTGTTGAGTGTGCTTGTGTGATTGAATTGCCAGAGTTAAAGGGGCGGGAAAAGCTTACTGGCAAGCCGCTGTTTGTCCTAGTTAAAGGAGCCTGA 549 0.4536 MASNDAQDPRLPRISSAIRVIPDFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDQNISVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQAGDRALVIDDLIATGGTLCAAIKLLERVGAQVVECACVIELPELKGREKLTGKPLFVLVKGA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60465g00023 182 NCBIfam adenine phosphoribosyltransferase 15 179 IPR005764 GO:0003999|GO:0005737|GO:0006168
Stsc60465g00023 182 Gene3D - 2 181 IPR029057 -
Stsc60465g00023 182 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 180 - -
Stsc60465g00023 182 SUPERFAMILY PRTase-like 17 174 IPR029057 -
Stsc60465g00023 182 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
Stsc60465g00023 182 Pfam Phosphoribosyl transferase domain 40 164 IPR000836 -
Stsc60465g00023 182 CDD PRTases_typeI 48 180 IPR000836 -
Stsc60465g00023 182 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60465g00023 Stsc-Chr60465 86836 89789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60465g00023 1 182 PRT Gene Family AT1G27450 81.319 2.74e-108 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60465g00023 K00759 - qsu:112027152 327.791