Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60465g00021 ATGAGTTGCAACGGTTGCCGGGTGCTGCGCAAGGGATGCAGCGACATGTGCCCTCTCAGGACATGCCTCCACTGGATTCCATCCCCTCAGGCACAAGCTCACGCCACTCTCTTCCTCGCTAAGTTCTTCGGCCGCTCCGATCTCTTTTCTTTCATTTCCTCCGTTCCACTCAATGACAGGCCCGCGCTGTTTCAGTCTCTGCTTTATGAAGCTTGCGGAAGAACCATCAATCCTGTCAACGGTGCTGTAGGACTGCTATCAACCGGTAACTGGCACCTCTGCCAGGATGCTCTCCGCACTGTCCTTGCCGGCGGCGTCCTCACCCCGTTGCCGGTCTTGGATGACTCTTCCGGTTCCCATGAAATGCCACCTGCAGAGGCGTCCAAGAGGCGCAGAGTTAGCGGTGAACAATCCGAGAAAACCTTGATGAGATTTGATGGCATTTGCAGCCACAATCAGAGAAAGCTCTTGAATCTCTTCGTTTGA 486 0.5453 MSCNGCRVLRKGCSDMCPLRTCLHWIPSPQAQAHATLFLAKFFGRSDLFSFISSVPLNDRPALFQSLLYEACGRTINPVNGAVGLLSTGNWHLCQDALRTVLAGGVLTPLPVLDDSSGSHEMPPAEASKRRRVSGEQSEKTLMRFDGICSHNQRKLLNLFV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60465g00021 161 MobiDBLite consensus disorder prediction 114 136 - -
Stsc60465g00021 161 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 135 - -
Stsc60465g00021 161 Pfam Lateral organ boundaries (LOB) domain 2 97 IPR004883 -
Stsc60465g00021 161 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60465g00021 Stsc-Chr60465 77056 77854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60465g00021 1 136 AS2 family AT3G49940 62.500 1.17e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc60465g00021 LOB 2.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60465g00021 - - adu:107461241 270.781