Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60465g00020 ATGACAGGCCCGTCTCTGCTTTATGAAGCTTGCGGAAGAACCATCAATCCTGTCAACGGTGCTGTAGGACTGCTATCAACCGGTAACTGGCACCTCTGCCAGGATGCTCTCCGCACTGTCCTTGCCGGCGGCGTCCTCACCCCGTTGCCGGTCTTGGATGACTCTTCCGGTTCCCATGAAATGCCACCTGCAGAGGCGTCCAAGAGGCGCAGAGTTAGCGGTGAACAATCCGAGAAAACCTTGATGAGATTTGATGGCATTTGCAGCCACAATCAGAGAAAGCTCTTGAATCTCTTCGTTTGA 303 0.5347 MTGPSLLYEACGRTINPVNGAVGLLSTGNWHLCQDALRTVLAGGVLTPLPVLDDSSGSHEMPPAEASKRRRVSGEQSEKTLMRFDGICSHNQRKLLNLFV 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60465g00020 100 MobiDBLite consensus disorder prediction 63 77 - -
Stsc60465g00020 100 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 5 76 - -
Stsc60465g00020 100 MobiDBLite consensus disorder prediction 52 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60465g00020 Stsc-Chr60465 77056 77854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60465g00020 5 75 AS2 family AT3G49940 54.930 1.15e-20 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc60465g00020 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60465g00020 - - adu:107461241 139.813