Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60463g00034 ATGGCAGATTTGAAATTACATGGATTTTGGTATAGTCCCTTTACTATGAGGGTAGCATGGACCCTCAAGTTGAAGGGTCTATCATATGAGAACATTGAGGAAGATCGCTACAATAAGAGTCCTCAACTTCTTGAGTACAACCCTGTGCACAAGAAGATCCCAGTGCTTGTCCATGGTGGAAAACCCATTTGTGAGTCCATGGTAATTGTTGAATACATTGATGAGTTATGGCCACAGAATCCATTGCTCCCTCGTGATCCCTATCAAAGAGCTCAAGCAAAGTTTTGGGTTGCATATGCTGAACAGATGGCTCCTGTACGTCCAGCACTCCTCCATAGTACTAGTGCTGAAGAGAAAAAAAAGGTCGTAGAGAAGACCTGGGAACATTTCAAAGTCCTTGAAGATCATTGCTTAGCTGATAAGAGGAAATTCTTTGGTGGGGACAAACTTAACATTGTGGACATAGCTTTTGGATCACTTTTCGCATTTTTTGTTACTATAGAAGATATTAAACAAGTGAAGATCCTAGTAGCTGAAAAGTTCCCTCTCCTGCATTTATGGTTTGACAATTTCAAGAATGCCCCAATCATCAAAGAGAACTTCCCTGATAAGGAGAAAATGTTGGCAACTATTAAGTATATCTTGGAGAGGAAGTTGGCATCTTCCTAA 669 0.4051 MADLKLHGFWYSPFTMRVAWTLKLKGLSYENIEEDRYNKSPQLLEYNPVHKKIPVLVHGGKPICESMVIVEYIDELWPQNPLLPRDPYQRAQAKFWVAYAEQMAPVRPALLHSTSAEEKKKVVEKTWEHFKVLEDHCLADKRKFFGGDKLNIVDIAFGSLFAFFVTIEDIKQVKILVAEKFPLLHLWFDNFKNAPIIKENFPDKEKMLATIKYILERKLASS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60463g00034 222 SUPERFAMILY Thioredoxin-like 3 101 IPR036249 -
Stsc60463g00034 222 Gene3D - 83 221 - -
Stsc60463g00034 222 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Stsc60463g00034 222 CDD GST_N_Tau 4 77 - -
Stsc60463g00034 222 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Stsc60463g00034 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Stsc60463g00034 222 SFLD Main (cytGST) 1 219 - -
Stsc60463g00034 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 207 IPR045073 -
Stsc60463g00034 222 FunFam Glutathione S-transferase GSTU6 1 83 - -
Stsc60463g00034 222 CDD GST_C_Tau 87 214 IPR045074 GO:0004364|GO:0006749
Stsc60463g00034 222 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Stsc60463g00034 222 PRINTS Omega-class glutathione S-transferase signature 144 163 IPR005442 GO:0004364|GO:0005737
Stsc60463g00034 222 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Stsc60463g00034 222 Gene3D Glutaredoxin 1 82 - -
Stsc60463g00034 222 SUPERFAMILY GST C-terminal domain-like 75 216 IPR036282 -
Stsc60463g00034 222 Pfam Glutathione S-transferase, C-terminal domain 110 194 IPR004046 -
Stsc60463g00034 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60463g00034 Stsc-Chr60463 154668 155589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60463g00034 3 217 Glutathione S-transferase Gene Family AT2G29420 43.056 9.11e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60463g00034 K00799 - gmx:547584 291.967