LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc60463g00029	ATGGAAGATTTGAAGTTACATGGATTTTGGTATAGTCCCTTTACTATGAGGGTGGTATGGACCCTCAAGTTGAAGGGTCTATCATATGAGAACATCGAGGAAGATCGTTTCAATAAGAGTCCTCAACTTCTTGAATACAATCCTGTGCATAAGAAGGCCCCAGTGCTTGTCCATGGTGGGAAACCCATTTGTGAGTCCATGGTAATTGTTGAATACATTGATGAGTTATGGCCACAGAATCCATTGCTCCCTCATGATCCCTATCAGAGAGCTCAAGCAAGATTTTGGGTTGCATATGCTGAACAGATGGTTCCTGTAATACCAGCGCTCATCTTTAGTACTAATGCTGAAGAGAAAGAAAAGGCCGTAGAGAAGATGTGGGAACATTTCAAAGTCCTTGAAGATCATTGCTTAGCTGATAAGAGGAAATTCTTTGGTGGGGACAAACTTAACATTGTGGACATAGCTTTTGGATCTCTTTTCATGTTTCTTATCACTATAGAAGATCTTAAACAAGTGAAGATCCTAGTTGCTGAAAAATTCCCTCTCTTGCATTCATGGTTGGATAATTTCAAGAATGCCCCAATCATCAAAGAAAACTTCCCTGATAGAGAGAAAATTGTGGCTATTATAAAGCCTATCTTCGAGAGGAGGTTGGCATCTTCCTAA	669	0.4006	MEDLKLHGFWYSPFTMRVVWTLKLKGLSYENIEEDRFNKSPQLLEYNPVHKKAPVLVHGGKPICESMVIVEYIDELWPQNPLLPHDPYQRAQARFWVAYAEQMVPVIPALIFSTNAEEKEKAVEKMWEHFKVLEDHCLADKRKFFGGDKLNIVDIAFGSLFMFLITIEDLKQVKILVAEKFPLLHSWLDNFKNAPIIKENFPDREKIVAIIKPIFERRLASS	222

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc60463g00029	222	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	2	81	IPR004045	-
	Stsc60463g00029	222	CDD	GST_N_Tau	4	77	-	-
	Stsc60463g00029	222	Gene3D	Glutaredoxin	1	85	-	-
	Stsc60463g00029	222	FunFam	Glutathione S-transferase GSTU6	1	83	-	-
	Stsc60463g00029	222	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	86	214	IPR010987	-
	Stsc60463g00029	222	SUPERFAMILY	GST C-terminal domain-like	75	217	IPR036282	-
	Stsc60463g00029	222	Gene3D	-	86	222	-	-
	Stsc60463g00029	222	FunFam	Glutathione S-transferase U9	83	221	-	-
	Stsc60463g00029	222	Pfam	Glutathione S-transferase, N-terminal domain	3	75	IPR004045	-
	Stsc60463g00029	222	CDD	GST_C_Tau	87	212	IPR045074	GO:0004364\|GO:0006749

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc60463g00029	Stsc-Chr60463	136843	138200	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc60463g00029	2	215	Glutathione S-transferase Gene Family	AT3G09270	45.833	7.80e-58	181

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc60463g00029	K00799		-	gmx:547584	305.064

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