Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60463g00029 ATGGAAGATTTGAAGTTACATGGATTTTGGTATAGTCCCTTTACTATGAGGGTGGTATGGACCCTCAAGTTGAAGGGTCTATCATATGAGAACATCGAGGAAGATCGTTTCAATAAGAGTCCTCAACTTCTTGAATACAATCCTGTGCATAAGAAGGCCCCAGTGCTTGTCCATGGTGGGAAACCCATTTGTGAGTCCATGGTAATTGTTGAATACATTGATGAGTTATGGCCACAGAATCCATTGCTCCCTCATGATCCCTATCAGAGAGCTCAAGCAAGATTTTGGGTTGCATATGCTGAACAGATGGTTCCTGTAATACCAGCGCTCATCTTTAGTACTAATGCTGAAGAGAAAGAAAAGGCCGTAGAGAAGATGTGGGAACATTTCAAAGTCCTTGAAGATCATTGCTTAGCTGATAAGAGGAAATTCTTTGGTGGGGACAAACTTAACATTGTGGACATAGCTTTTGGATCTCTTTTCATGTTTCTTATCACTATAGAAGATCTTAAACAAGTGAAGATCCTAGTTGCTGAAAAATTCCCTCTCTTGCATTCATGGTTGGATAATTTCAAGAATGCCCCAATCATCAAAGAAAACTTCCCTGATAGAGAGAAAATTGTGGCTATTATAAAGCCTATCTTCGAGAGGAGGTTGGCATCTTCCTAA 669 0.4006 MEDLKLHGFWYSPFTMRVVWTLKLKGLSYENIEEDRFNKSPQLLEYNPVHKKAPVLVHGGKPICESMVIVEYIDELWPQNPLLPHDPYQRAQARFWVAYAEQMVPVIPALIFSTNAEEKEKAVEKMWEHFKVLEDHCLADKRKFFGGDKLNIVDIAFGSLFMFLITIEDLKQVKILVAEKFPLLHSWLDNFKNAPIIKENFPDREKIVAIIKPIFERRLASS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60463g00029 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Stsc60463g00029 222 CDD GST_N_Tau 4 77 - -
Stsc60463g00029 222 Gene3D Glutaredoxin 1 85 - -
Stsc60463g00029 222 FunFam Glutathione S-transferase GSTU6 1 83 - -
Stsc60463g00029 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Stsc60463g00029 222 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Stsc60463g00029 222 Gene3D - 86 222 - -
Stsc60463g00029 222 FunFam Glutathione S-transferase U9 83 221 - -
Stsc60463g00029 222 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Stsc60463g00029 222 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Stsc60463g00029 222 SFLD Glutathione Transferase (cytosolic) 1 219 IPR040079 -
Stsc60463g00029 222 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Stsc60463g00029 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 208 IPR045073 -
Stsc60463g00029 222 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Stsc60463g00029 222 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Stsc60463g00029 222 PRINTS Omega-class glutathione S-transferase signature 144 163 IPR005442 GO:0004364|GO:0005737
Stsc60463g00029 222 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Stsc60463g00029 222 Pfam Glutathione S-transferase, C-terminal domain 104 194 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60463g00029 Stsc-Chr60463 136843 138200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60463g00029 2 215 Glutathione S-transferase Gene Family AT3G09270 45.833 7.80e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60463g00029 K00799 - gmx:547584 305.064