Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60463g00003 ATGTTATACTTCACACGCACTTTTGAGTCTGTCAAGTTCTGCAAAATGGATACTTGGTTCTTGGTGGTGGCCTCGGCATGCGTCTGTCTTCTCATCAGAGCAATAATAATTAACCTTACCACGACCACTCACGGGCCTCCTCTCCCCCCGGGCCCACCATACATTCCTATTTTAACAAGCATCTCCTGGATTGCTAAATCATTCTCCCAGATTGAGCCCATCCTCGTGGGCCTACGGGCCAAGTACGGGCCCATCATCACACTCCGCATTATCGGCCGCCCTGCAATCTTCGTGGCGGACCGCTCCCTCGCCCACCAGGCACTTGTCCAGAAGGGCGCCGTGTTCTCCGACCGGCCACCCGCCCTCGCCGTCTCCCGCATCATTACCAAAAACCAGCACAACATCAACTCCGCACACTACGGCTCCACGTGGCGCACCCTCCGCCGCAACCTCACCAGCGAGATGCTCCACCCTAACCGCGTCAAATCGTTCTCCTCGGTACGGCGCTGGGTCCTCCAAGTCCTCGTGAACCGCCTCAAGTCCGATTCCGAAACTGGAGACTCCGTCAGAGTCATCGATCATTTCCACTTCGCCATGTTCTGCTTACTCGTCTTCATGTGCTTCGGGGAGAAGCTGGACGAAAAGCAAGTCAAGGACGTGGAGCGTGTTCAGCGAGCGCTGCTTGTTTCGGTTAGTGGATTCAACGTCCTCAATTTCTGGCCACCGATTACTCGGATTCTCTTCCGGAAACGGTGGCAGCAGCTCTTTAGGCTTAAGAAGGAGCAGAGCGATGTGTTGGTTCCGCTAATTAGGGCTAGAAAGTCTGCAAAGGAACATCGCGGTGGTGATGGCGGCGGTGGTGATGTTGTTTCGTATGTAGATACTCTGTTGGATTTGGAGTTGCCGGAGGAGAAGCGGAAATTGGACGACGAAGAACTGGTGACGGTGTGTTCGGAGTTCTTGAGCGCCGGCACGGACACCACGGCCACAGCGCTGCAGTGGATTATGGCGAATGTGGTGAAGTACCCGCACATTCAGCAGAGACTCGTAGCGGAGATTAGGGAGGTGAAGGGTGACAGTTACGGTGACGGTGAGAGTAAAGAGGAGGTGAAAGAGGAGGAGCTGCAGAGGATGCCGTACTTGAAGGCCGTGGTGTTGGAAGGGCTGCGGCGCCATCCTCCCGGGCACTTTGTGCTGCCGCATGCGGTTACAGAGGATGTTGAGTTGAATGGTTACTTGATACCGAAGAAAGGGACGGTGAATTTCATGGTGGCGCAGATAGGTTGGGACCCTGAGGTTTGGGAGGATCCAATGGAGTTCAAGCCGGAGAGGTTCTTGGAGAAGGAGAAGGAAGATGGTGTTCCTTTCGATCTCACCGGAAACAAGGAGATCAAGATGATGCCGTTTGGAGCAGGGAGGAGGATCTGCCCTGGTTTTAACTTAGCAATGCTCCATCTGGAGTACTTTGTAGCCAATTTGGTCTGGAATTTCGATTGGAAGGTTCCGGAAGGAGGAAGCGTGGATTTGTCGGAGAAGCGGGAGTTTACCATTGTCATGAAGAATCCATTGCATGCTCATATTACTCCCAGGATCTGA 1596 0.5382 MLYFTRTFESVKFCKMDTWFLVVASACVCLLIRAIIINLTTTTHGPPLPPGPPYIPILTSISWIAKSFSQIEPILVGLRAKYGPIITLRIIGRPAIFVADRSLAHQALVQKGAVFSDRPPALAVSRIITKNQHNINSAHYGSTWRTLRRNLTSEMLHPNRVKSFSSVRRWVLQVLVNRLKSDSETGDSVRVIDHFHFAMFCLLVFMCFGEKLDEKQVKDVERVQRALLVSVSGFNVLNFWPPITRILFRKRWQQLFRLKKEQSDVLVPLIRARKSAKEHRGGDGGGGDVVSYVDTLLDLELPEEKRKLDDEELVTVCSEFLSAGTDTTATALQWIMANVVKYPHIQQRLVAEIREVKGDSYGDGESKEEVKEEELQRMPYLKAVVLEGLRRHPPGHFVLPHAVTEDVELNGYLIPKKGTVNFMVAQIGWDPEVWEDPMEFKPERFLEKEKEDGVPFDLTGNKEIKMMPFGAGRRICPGFNLAMLHLEYFVANLVWNFDWKVPEGGSVDLSEKREFTIVMKNPLHAHITPRI 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60463g00003 531 Gene3D Cytochrome P450 42 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 CDD CYP77_89 81 524 - -
Stsc60463g00003 531 Pfam Cytochrome P450 49 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 28 523 - -
Stsc60463g00003 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Stsc60463g00003 531 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 SUPERFAMILY Cytochrome P450 49 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60463g00003 531 FunFam Cytochrome P450 family protein 42 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60463g00003 Stsc-Chr60463 8655 10994 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60463g00003 16 530 Cytochrome P450 AT1G64940 56.430 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60463g00003 K24184 - gmx:100795683 721.079