Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60461g00009 ATGAGACTAAGCTGCAACGGTTGCCGAGTATTAAGAAAGGGATGCAGCCGGGAATGCCCGATCAGGCCATGCATTCAGTGGATAAGGTCGCCGCAGTCGCAGGCCAACGCCACCATCTTCCTGGCAAAATTCTACGGCCGTGCCGGCCTCATCAACCTCATCCATGCCGCGGCTCCGCATCTGCGACCAGCGGCGTTTAGGTCGCTGCTCCACGAAGCATGCGGGAGGATCGTGGATCCGATTCTTGGATGCACGGGGTTGCTGTCGTCGGGGCGGTGGCACCTGTGCGAGGCAGCCGTGGGGGCGGTTCTGAACGGAGCCCCGATCGGGAAGATGTCGGCGTGGTGTGAGTCCGCGAGTTCTTCCATGCTGAGGGCGTGCGATATCAGACACGTGGCCAATAAGGAAGCGAAGAGTGGGCTGCACAAGGTGAAGGGGAGCAGCAGTAAGGGTTTCAAGCGGAACAGAGGAGGAAAAGCAGGGAAGAAAGGGAAGGAGATTGCTGAGGTCAGCGACGAGGAATGGGCTTCTGGACTGAGTGACCATAGAAGTAGTCTCGTTAATAACTGTAACGGTGAGAGCTGCTCCGTGGAAACGGAAACGGAGACGGCGGTGGTGGAGGCTGCTGCTGAGGCGTGTGATGATGGAGGCTTGGACCTCAGCTTGACTTTGGGATGTTTCTCGTCTTAA 690 0.5797 MRLSCNGCRVLRKGCSRECPIRPCIQWIRSPQSQANATIFLAKFYGRAGLINLIHAAAPHLRPAAFRSLLHEACGRIVDPILGCTGLLSSGRWHLCEAAVGAVLNGAPIGKMSAWCESASSSMLRACDIRHVANKEAKSGLHKVKGSSSKGFKRNRGGKAGKKGKEIAEVSDEEWASGLSDHRSSLVNNCNGESCSVETETETAVVEAAAEACDDGGLDLSLTLGCFSS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60461g00009 229 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Stsc60461g00009 229 MobiDBLite consensus disorder prediction 144 167 - -
Stsc60461g00009 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 211 - -
Stsc60461g00009 229 Pfam Lateral organ boundaries (LOB) domain 4 99 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60461g00009 Stsc-Chr60461 66379 67068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60461g00009 1 224 AS2 family AT3G02550 44.017 3.22e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc60461g00009 LOB 5.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60461g00009 - - pcin:129288305 211.846