Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60460g00014 ATGGATAGCAGGTTGGCAAACTCTTCTTTTGGTTCTCTTAAATTGCCCGTTGGTTACAGATTCTGCCCATCAGACGAGGTTTTTGTCTCTTGGTACCTCAAAAACAAGGCCCTTTCAAAAACATTGGGTTTTGATGTTGTTCCTCAGTTCGATGTCTTCAAAACTGAGCCTAAGAATCTCCCTTCAGGAGGAAGGGTATTTCTAGACACAAGGTACTTTTACTTTGATCTGAAAGACAGTGTGTTTGATGACAAAAACAAGAGGGAAGCAGGGAAAGGGCACTGGAAAATCGTAGCGAAAGGGAATAAGGAGATTGTAAATAAGAACAACAAAGTCATTGGCTTAAAGACAAAGCTAGTTTTCTGGAGGAAGAAGAGCCGCAACCACTTTGTCAAAACTAAGTGGATTATGTTTGAGTACCGCGTTTTTCTCCCAACAACAACAACCACACCTTCCAACCCATCTCAGATATTGTCATCATGGGCGGGATACAAAATATATCTGAAGAAAGATAAGAGAAAGAAGAAGGCAAAGCTTTTTTGTGATGAGGAAAGCAGTGATGATGACGAGGATGAAGATGCCGAAAAAGCAGAAGAAGAAGAAGCAGTGGCGAGTGATGAAGTGAATTTTGCAGACGAGATAAGTGGAATTAACTCAGGCCCTCCTTCGCCAACTTCATCCGATGAATCCTCTGTTACAAGTTGA 705 0.4156 MDSRLANSSFGSLKLPVGYRFCPSDEVFVSWYLKNKALSKTLGFDVVPQFDVFKTEPKNLPSGGRVFLDTRYFYFDLKDSVFDDKNKREAGKGHWKIVAKGNKEIVNKNNKVIGLKTKLVFWRKKSRNHFVKTKWIMFEYRVFLPTTTTTPSNPSQILSSWAGYKIYLKKDKRKKKAKLFCDEESSDDDEDEDAEKAEEEEAVASDEVNFADEISGINSGPPSPTSSDESSVTS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60460g00014 234 ProSiteProfiles NAC domain profile. 15 169 IPR003441 GO:0003677|GO:0006355
Stsc60460g00014 234 SUPERFAMILY NAC domain 7 169 IPR036093 GO:0003677|GO:0006355
Stsc60460g00014 234 PANTHER NAC TRANSCRIPTION FACTOR 56 15 192 - -
Stsc60460g00014 234 Gene3D NAC domain 24 175 IPR036093 GO:0003677|GO:0006355
Stsc60460g00014 234 MobiDBLite consensus disorder prediction 177 234 - -
Stsc60460g00014 234 MobiDBLite consensus disorder prediction 216 234 - -
Stsc60460g00014 234 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Stsc60460g00014 234 MobiDBLite consensus disorder prediction 184 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60460g00014 Stsc-Chr60460 100702 103125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60460g00014 11 170 NAC Transcription Factor Family AT5G13180 34.568 1.66e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc60460g00014 NAM 4.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60460g00014 - - ahf:112697144 266.544