Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60459g00033 | ATGTCCAATGGCTCTTTGCAAGATAGACTATACGGGGGACTGTCAACGAGAAAAATACTAGACTGGCCAACTAGACTCTCCATTGCTCTTGGTGCCGCTCGAGGTTTGGCATATTTGCACTCGTTCCCTGGGCGATCTGTAATTCACAGGGACGTGAAATCAAGCAATATACTTCTGGATCACAGCATGTGTGCTAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCACAGGAAGGAGATAGTGCTGTTTCGCTCGAAGTAAGAGGAACTGCAGGATATCTTGATCCTGAGTACTATACAACCCAGCAATTATCTGCAAAGAGTGATGTCTTTAGCTTTGGTGTGGTTCTTCTTGAAATTGTGAGTGGCCGGGAGCCTCTCAACATCCACAGACCGCGGAACGAGTGGAGTTTGGTTGAATGGGCTAAACCGTATATAAGGGCATCAAAGATTGAGGAAATTGTGGATCCCGGCATCAAGGGAGGGTACCATGCAGAAGCAATGTGGAGAGTGTTGGAAGTAGCATTGCAATGTGTTGAGCCTTTCTCAGCAAATAGACCGGTCATGGATGATGTCATGCGAGAGTTGGAAGATGCTCTGATCATAGAAAACAATGCATCAGAGTACATGAAGTCCATAGAGAGCATTGGATCCAACCGCTATTCCATTGTCATGGAGAAAAGGGTGCTACCCTCGACTTCATCCATGGTGGAATCAACCATCATACCTCAATCCTTGAACCATCCGCAGCCAAGATAG | 762 | 0.4606 | MSNGSLQDRLYGGLSTRKILDWPTRLSIALGAARGLAYLHSFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSAVSLEVRGTAGYLDPEYYTTQQLSAKSDVFSFGVVLLEIVSGREPLNIHRPRNEWSLVEWAKPYIRASKIEEIVDPGIKGGYHAEAMWRVLEVALQCVEPFSANRPVMDDVMRELEDALIIENNASEYMKSIESIGSNRYSIVMEKRVLPSTSSMVESTIIPQSLNHPQPR | 253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60459g00033 | 253 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 221 | - | - | |
Stsc60459g00033 | 253 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 201 | IPR011009 | - | |
Stsc60459g00033 | 253 | SMART | serkin_6 | 1 | 202 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60459g00033 | 253 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 47 | 59 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc60459g00033 | 253 | PANTHER | OS01G0750732 PROTEIN | 1 | 204 | - | - | |
Stsc60459g00033 | 253 | FunFam | Calmodulin-binding receptor-like cytoplasmic kinase 3 | 1 | 217 | - | - | |
Stsc60459g00033 | 253 | ProSiteProfiles | Protein kinase domain profile. | 1 | 202 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60459g00033 | 253 | Pfam | Protein tyrosine and serine/threonine kinase | 1 | 197 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60459g00033 | Stsc-Chr60459 | 171596 | 173186 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60459g00033 | 1 | 204 | Receptor kinase-like Gene Family | AT1G67720 | 52.451 | 4.07e-59 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Stsc60459g00033 | PK_Tyr_Ser-Thr | 1.1e-25 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60459g00033 | - | - | gmx:100781986 | 445.662 |