Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60459g00030 ATGGCTTCCTCCTTCTGCCACCATCATCATCATCATCATCCACATACCCTTATTCCACTAATCATCATATCCTTCTTCATTTCCTTCACTTTTCATCATGCTTACTCAATTCAATTCAAAATCCCTGCTTTCAATCCTGGTGATGGCAACATACTCTACCTAGGATCTGCAGCATCAAGGGATGGTTTTGCTGATTTCAATGTGAATGAATTGTACACATGTCAAGTTGGATGGACCATCTACTCCAAAAAGGTGTTACTTTGGGACTCAAGAACTGGTCAACTCACTGATTTCACAACTCACTACTCATTCATCATTGACACACAAAATAAAACCAACTATGGCCATGGCCTTGCATTCTTCATTGCTCCTGTTGATTTTGAAATCCCACCAAATTCCTCTGGTGGATTTCTTGGATTATTCAACACCACAACAAAGGATTCATCACAGAATCAAATTGTCCTGGTTGAGTTTGACTCTTTCCCAAACTCTGAATGGGGTGAGACTGTGCAGCATGTTGGGATCAATAACAATTCAATTGTTTCAGCAAAATGGACTCCTTGGAATACTAGTTTACACAGTGGAGACACTGCTGATGTTTGGATTAGTTACAACTCCACAGCTAAGAACTTGAGTGTGTCTTGGAAGTACCAAAACTCATCTGACCCTGAAGAACACACTAGTCTCTCTCTTGCAATTGATTTGACAAGGGTCTTACCTGAGTGGGTCACACTTGGATTTTCTGCTGCAACAGGTTCCTTTGGAGAGACTCACACTCTTCTGTCATGGGAGTTCAACTCAACTTTGGACAGAACTGAAGAAAACAATTCAAAGAAGACAAGGTTAGTTGTGATTCTTACTGTTTCTTGTAGTGCTGTTGCAGTGGGAGCAATTGCAGCATATGGAGTACTTTGGAATAGGAGGAAGAAGAAAAGCAAGAAAGATCAATTAGAGGCTATGAATTTAACCTCAATCAATGATGACCTTGAAAGAGGAGCAGGACCAAGAAGGTTCTCATACAAAGAACTTACTTTGGCTACCAACAACTTCTCCAAAGAGAGGCTGTTGGGTAAAGGAGGGTTTGGATCTGTCTACAGAGGTTACTTTGCAAATCAAGATTTAACAGTAGCTGTGAAGAAGATATCAAGAGGATCTAGACAAGGGAAGAAAGAGTATGTAACTGAGGTCAAAGTCATTAGCCAACTCAGACACAGGAACCTTGTGCAACTCTTGGGTTGGTGCCATGACAAAGGGGAGTTCTTGCTTGTTTATGAGTTCATGCCGAATGGAAGCCTTGACTCTCACCTATTTGGTAGCAAAAAGTCACCAATCCCATGGAATGTAAGGCACAAGATAGGACTTGGATTAGCATCTGCAGTGCTATATCTTCATGAAGAATGGGAGAGGTGTGTGGTGCATAGGGACATCAAATCAAGCAATGTTATGCTGGATTCAACCTTCAATGTGAAGCTAGGTGACTTTGGACTAGCCAAACTCATGGACCATGAACTTGGTCCCCAAACAACAGGGATAGCTGGAACATTAGGGTACTTAGCACCAGAATACGTGAGCACAGGAAGAGCAAGTAAAGAATCTGACGTGTACAGCTTTGGTGTGGTGGCATTGGAGATAGCTACAGGGAGGAAAGCCCTTGATGTGATGGAAGAGAGTGACGGTGAAAAGGGGTTGGTTGAGTGGGTTTGGGACCAGTACGGAAGAGGGGAAGTGGTTAAGGCAGTTGATGGGAGGTTGGGGAAAGATTTTGATGAAAGGGAAGCAGAGTGCTTGATGGTTGTGGGGCTATGGTGTGCTCACCCTGATGCAAATATGAGACCGTCAATAAGACAAGCAGTTCATGTGCTTAATTTTGAAGCTGCTATGCCAACCAACCTTCCAACAAAGAGACCTGTTGCAACATACCATGATCCTACTACTACACCTACACCAACACCAACACCATCAGTTCAACATTCCATAACCACAAGCCTTCACATTGGTCGTTGA 2004 0.4286 MASSFCHHHHHHHPHTLIPLIIISFFISFTFHHAYSIQFKIPAFNPGDGNILYLGSAASRDGFADFNVNELYTCQVGWTIYSKKVLLWDSRTGQLTDFTTHYSFIIDTQNKTNYGHGLAFFIAPVDFEIPPNSSGGFLGLFNTTTKDSSQNQIVLVEFDSFPNSEWGETVQHVGINNNSIVSAKWTPWNTSLHSGDTADVWISYNSTAKNLSVSWKYQNSSDPEEHTSLSLAIDLTRVLPEWVTLGFSAATGSFGETHTLLSWEFNSTLDRTEENNSKKTRLVVILTVSCSAVAVGAIAAYGVLWNRRKKKSKKDQLEAMNLTSINDDLERGAGPRRFSYKELTLATNNFSKERLLGKGGFGSVYRGYFANQDLTVAVKKISRGSRQGKKEYVTEVKVISQLRHRNLVQLLGWCHDKGEFLLVYEFMPNGSLDSHLFGSKKSPIPWNVRHKIGLGLASAVLYLHEEWERCVVHRDIKSSNVMLDSTFNVKLGDFGLAKLMDHELGPQTTGIAGTLGYLAPEYVSTGRASKESDVYSFGVVALEIATGRKALDVMEESDGEKGLVEWVWDQYGRGEVVKAVDGRLGKDFDEREAECLMVVGLWCAHPDANMRPSIRQAVHVLNFEAAMPTNLPTKRPVATYHDPTTTPTPTPTPSVQHSITTSLHIGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60459g00030 667 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Stsc60459g00030 667 PANTHER - 69 625 - -
Stsc60459g00030 667 Pfam Legume lectin domain 37 278 IPR001220 GO:0030246
Stsc60459g00030 667 ProSitePatterns Legume lectins alpha-chain signature. 239 248 IPR000985 -
Stsc60459g00030 667 ProSitePatterns Protein kinases ATP-binding region signature. 356 380 IPR017441 GO:0005524
Stsc60459g00030 667 Gene3D - 34 294 - -
Stsc60459g00030 667 ProSiteProfiles Protein kinase domain profile. 350 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60459g00030 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 283 IPR013320 -
Stsc60459g00030 667 MobiDBLite consensus disorder prediction 643 667 - -
Stsc60459g00030 667 FunFam L-type lectin-domain containing receptor kinase IX.1 35 278 - -
Stsc60459g00030 667 CDD STKc_IRAK 356 622 - -
Stsc60459g00030 667 SUPERFAMILY Protein kinase-like (PK-like) 334 653 IPR011009 -
Stsc60459g00030 667 Gene3D Transferase(Phosphotransferase) domain 1 427 642 - -
Stsc60459g00030 667 FunFam L-type lectin-domain containing receptor kinase IX.1 335 426 - -
Stsc60459g00030 667 FunFam Lectin-domain containing receptor kinase A4.3 427 642 - -
Stsc60459g00030 667 Pfam Protein kinase domain 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60459g00030 667 CDD lectin_legume_LecRK_Arcelin_ConA 37 269 IPR001220 GO:0030246
Stsc60459g00030 667 SMART serkin_6 350 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60459g00030 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60459g00030 Stsc-Chr60459 152498 154728 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60459g00030 20 641 Receptor kinase-like Gene Family AT5G10530 57.166 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc60459g00030 Pkinase 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60459g00030 - - qsa:O6P43_025188 874.004