Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60459g00026 ATGGCCTTGTTTTCTTCCATGTTTATGATCTTCACTTCATTGATTGTTCTCTTTAACACTAACACTGTAGAGTCTGTTTCATTCAACTTTGATAATTTCATGCCAAATCAATACCTAATAAAATTCGAGGGAGATGCATTTTCCTCAGAACAAGTTTTACAGCTCACAAAGAACAGAATTGACGGCCCAATTACGAAAAGCGCTGGTCGTGCCTCCTTTGATCAACCGGTCAAGCTTTGGGATAAAGGAACGAGACAACTCACTGACTTCACCACGCATTTCTCGTTTATTATGAAAGCTGTTAATCCCGCTATGTTTGGTGATGGATTATCATTCTTCATTGCACCCTTTGAATCAACCATCCCAAGCAACTCAACTGGAGGATTCCTTGGCCTCTTCAGCGAGGACTCTGCATTCAACAAAACTGCCAATCAAATAGTCGCTGTGGAGTTTGACAGCTTTAATAATACATGGGATCCACCCTCAAATCATGTTGGTATCAACGTCAATTCTATTATATCTGTTACAAATGTGAGTTGGAATGGGGACATGAAGAACGGATCCGTTGGTAATGCTTGGATTTCATACAACTCCACCACCAACAATCTCTCCGTCTTCCTTACTTATGCTGCTAATCCAACATTCAGTGGCAATTCTAGTCTTTCATATGTCATTGATCTCAGGGAAGTCTTGCCGGAATTTGTTAGGATTGGTTTCTCCGCCGCAACCGGTAGTTGGATCGAAATACACAACATTCTTTCCTGGTCATTCAATTCAACCTTGGATTCCAGCAAGGGGAAAAGCAAGGTTGGTTTGGGAATCGGCTTGAGTGTTGGATTTGTCTCTCTATCATCCGTAATAGGAGCTGTTTCTTTTGTATTTTGGAGGAAGAAAAGAAACGGAGCCGCCGAAGATGAGGACGATACAGGGTTCGACGCTTCGATAGAAGACGAATTCGAAAGAGGAACCGGTCCAAAGCGGTTCACTCACAAGGAGCTAAGCCAAGCAACGAGCGGGTTCGCGGAAGAAGGAAAACTTGGAGAAGGAGGATTCGGAGGTGTGTACAAAGGAGCGGTAGGGAATCCAAGAATTGAAGTTGCTGTTAAGAGAGTTTCGAAAGGATCAAAGCAGGGGAAAAAGGAGTATATATCAGAAGTAAGAGTAATAAGCAGGTTAAGGCACAGGAATTTGGTGCAACTCATAGGGTGGTGCCATGAAAAGGGTGAGTTTCTTCTTGTTTATGAGTACATGCCTAATGGAAGCCTTGACTCGCATTTGTTTGGTAAAGGAGTCATGCTTTCTTGGGCTGTAAGGTACAAGGTTGCATTGGGTTTGGCATCTGCACTTGTTTATCTTCATGAAGAATGGGAACAATGCGTTGTCCATAGAGATATCAAGTCAAGCAATGTCATGCTAGATGCAAATTTCAATGCGAAACTCGGCGATTTCGGTCTAGCGAGGTTGGTGGACCATGAACTGGGGACTCAGACCACGGTTCTGGCAGGCACCATGGGGTACCTAGCTCCGGAGTGTGTGACCACTGGGAAATCAAGTAAGGAATCTGATGTGTATAGCTTTGGCGTGGTGCTGCTTGAGATAGCTTGCGGGAGAAGGCCGGTGCAAGTTAAAGAGGAGGCTGGCAAAGTGAGGTTGATAGAGTGGGTGTGGACTCTGTATGGACAGGGGAAGCTTCTAGAAGGTGCTGATTGGAGGTTACATTTGGAATTTGATGTGAAGCAAATGGAGTGCTTAATGACAGTTGGGTTGTGGTGTTGTCACCCTGATTTTAGCATGAGGCCTTCAATAAGGCAAGTGATAAATGTGCTTAATTTTCAAGCTCCTTTGCCAACACTTCCATCGCAGCTACCTGTGCCTATGTACTTTGCACCTCCCATGGAGATGTGCAAATTCACATACACTTCTTCTGGAACCACAGCCACGTCTTCTAAAGACTCCTCAAATTACTCATCCATGTCAGCAGGGTCCAGAAAATCTCTATTATAG 2004 0.4416 MALFSSMFMIFTSLIVLFNTNTVESVSFNFDNFMPNQYLIKFEGDAFSSEQVLQLTKNRIDGPITKSAGRASFDQPVKLWDKGTRQLTDFTTHFSFIMKAVNPAMFGDGLSFFIAPFESTIPSNSTGGFLGLFSEDSAFNKTANQIVAVEFDSFNNTWDPPSNHVGINVNSIISVTNVSWNGDMKNGSVGNAWISYNSTTNNLSVFLTYAANPTFSGNSSLSYVIDLREVLPEFVRIGFSAATGSWIEIHNILSWSFNSTLDSSKGKSKVGLGIGLSVGFVSLSSVIGAVSFVFWRKKRNGAAEDEDDTGFDASIEDEFERGTGPKRFTHKELSQATSGFAEEGKLGEGGFGGVYKGAVGNPRIEVAVKRVSKGSKQGKKEYISEVRVISRLRHRNLVQLIGWCHEKGEFLLVYEYMPNGSLDSHLFGKGVMLSWAVRYKVALGLASALVYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGTQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVLLEIACGRRPVQVKEEAGKVRLIEWVWTLYGQGKLLEGADWRLHLEFDVKQMECLMTVGLWCCHPDFSMRPSIRQVINVLNFQAPLPTLPSQLPVPMYFAPPMEMCKFTYTSSGTTATSSKDSSNYSSMSAGSRKSLL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60459g00026 667 CDD lectin_legume_LecRK_Arcelin_ConA 26 261 IPR001220 GO:0030246
Stsc60459g00026 667 Pfam Protein kinase domain 341 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60459g00026 667 CDD STKc_IRAK 354 610 - -
Stsc60459g00026 667 FunFam Lectin-domain containing receptor kinase A4.3 417 629 - -
Stsc60459g00026 667 SMART serkin_6 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60459g00026 667 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Stsc60459g00026 667 FunFam L-type lectin-domain containing receptor kinase IX.1 325 416 - -
Stsc60459g00026 667 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Stsc60459g00026 667 FunFam L-type lectin-domain containing receptor kinase IX.1 24 270 - -
Stsc60459g00026 667 Gene3D Transferase(Phosphotransferase) domain 1 417 630 - -
Stsc60459g00026 667 PANTHER - 49 619 - -
Stsc60459g00026 667 MobiDBLite consensus disorder prediction 644 667 - -
Stsc60459g00026 667 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60459g00026 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 261 IPR013320 -
Stsc60459g00026 667 SUPERFAMILY Protein kinase-like (PK-like) 324 636 IPR011009 -
Stsc60459g00026 667 Pfam Legume lectin domain 26 265 IPR001220 GO:0030246
Stsc60459g00026 667 ProSitePatterns Legume lectins alpha-chain signature. 231 240 IPR000985 -
Stsc60459g00026 667 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Stsc60459g00026 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Stsc60459g00026 667 Gene3D - 23 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60459g00026 Stsc-Chr60459 140145 142148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60459g00026 9 627 Receptor kinase-like Gene Family AT5G10530 51.643 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc60459g00026 Pkinase 3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60459g00026 - - vvo:131648651 967.992