Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60459g00014 ATGGAAAGAATCCGGAAAAGTAAGCAAGACAGAATGGACAAGATGCTTTCCAAGTATATGTCTTTCTGTGGCAATGTACCAGCTGAAATACTAGATATAGAGCAATTTGATGAACCTGTTCAAAAGCGTACCATAGACTTGATTTATGGTCTTGGAATTACCAAATTGGTCATGGCTTTCTCATTCATGAGGGCTTCCATGAAACAAAAAGATGCAATGGAGGCAATGTTGTTTGTTCATAAGCAGAAGCCTGGGTTCTGTGAACTGTTCTTTGTGCGTGAAGGGATACAAGTGTTCCTCCGAGAGAAGGATAGTGGTGAGACATTTATGGAGGATGATAATGGTGTCACAGTTGCAAGAATGAAAGATAATAACAAGTCAATTGCCAAATGGTTCCTACAAAAAATACAGTTCAGTCATAATGATAAAATCAATGATTCCAATCCTACAAGTTCTTCTTCGTCCTACGAGTTCCCTCTTATTAACCAAAACCAGTGGAAATCTTATTTCCCAGAGATTGACAACTATTATCAGGAATTGCTGTCTTTAAATTTAGAGGAAGAAAACCACAGCTCAGATTTTCCACCTACTCAATATGAGAAACTCAGAGAGGAACTGAATGAAGCATACAACAGGATCCAGACAAAGAGAAAAGAAGCCAAGCAAAATATAGAAAGGCATGAAAAGGCTGAATGGACTACTTGGTTATGCAACCGTCGGGAAGAAGAGCTTGAAAATCGAATAAAGGAAGAAGTTGCTGCAAGGGAAGAACTAAAGAAGGAACTGGAGAGAAAAAAGGAAGTAGTAGATCAAATAAGTGCTGAAGTTGAAGAGAGTAAGAAAATGCTAAGTTCAATGGGAGAGGTGCAATCTGAGCTAGTAAACAAGCTTGAAAGTTTTGCATTGCAAGAGTCAGAAGCAGAAATACAACAAAGAAAGGTAATAGAAGTGAAAACGCAGATTCTTGGGGAGATTGAGGAGTTGAGGAGACAAAGAATAATGGGGAGTTCAAGGAGGGTGGTGGCAGAGGCAGAGAATAATAATGGCTGTTGTGTTTTCAGGGAGTACAGAGAGGAGGAGATTGTGGTGGCCACACACAACTTTTGGGATCAGTTGAGGATGAAAAATGATTATGGAGGATGGAGTAATGTGTATAAAGGAAGGAGCAATGGTTGCACAGTTGCAATCAAGATGCTCAATTCTCTTCCTGCTTTCTCCCAACTTCATTATTTCTTAGCTAAGGTGAGGATTCTTGCCAGTATTCGGCATCCAAATCTGGTTGGTATGTTAGGCTTCTGCTGTGAGCCCAGATGCATAATTCTAGAATACATGGACAGTGGGAGCTTAGGAGACTTTCTATATTGTAGACTAAGAAGACGGTCCTTAGGGTGGCATGATCGGATAAGGATAGCGGTCGAAGTTTGCTCAGGCCTGGGCTTTCTCCATGCATATCAGCCCAGGACCATTATGCATTGTAGTATTGACCCATCGAATATCCTCCTAGATCACAACCTTGTTGCAAAGATCACAGGTTTTGGCCTTCATGGATGTGGTGAAGAATGCAATGTTGCAGCTGATGTAAAGGCTGTAGGGGTTTTGTTGATGCAGCTTTTGACTGGAAAAAGAAATTTTATGGGTATGGTTAGGGAGGATATTTTGGATGGAAGTGGTGGGAAATGGCCATTGGATGTAGCAAAGGAAGTTGAGGACTTAGCAAAGAGGTGCATGTCCAATGAAGACATGAGCATTGCAAGGATCATGGAGGAACTCAATGAGATTAAGAGAAAGCATGATAATATAGCTTGGACTAGGGTTGCTTAG 1821 0.4091 MERIRKSKQDRMDKMLSKYMSFCGNVPAEILDIEQFDEPVQKRTIDLIYGLGITKLVMAFSFMRASMKQKDAMEAMLFVHKQKPGFCELFFVREGIQVFLREKDSGETFMEDDNGVTVARMKDNNKSIAKWFLQKIQFSHNDKINDSNPTSSSSSYEFPLINQNQWKSYFPEIDNYYQELLSLNLEEENHSSDFPPTQYEKLREELNEAYNRIQTKRKEAKQNIERHEKAEWTTWLCNRREEELENRIKEEVAAREELKKELERKKEVVDQISAEVEESKKMLSSMGEVQSELVNKLESFALQESEAEIQQRKVIEVKTQILGEIEELRRQRIMGSSRRVVAEAENNNGCCVFREYREEEIVVATHNFWDQLRMKNDYGGWSNVYKGRSNGCTVAIKMLNSLPAFSQLHYFLAKVRILASIRHPNLVGMLGFCCEPRCIILEYMDSGSLGDFLYCRLRRRSLGWHDRIRIAVEVCSGLGFLHAYQPRTIMHCSIDPSNILLDHNLVAKITGFGLHGCGEECNVAADVKAVGVLLMQLLTGKRNFMGMVREDILDGSGGKWPLDVAKEVEDLAKRCMSNEDMSIARIMEELNEIKRKHDNIAWTRVA 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60459g00014 606 PANTHER OS02G0152300 PROTEIN 7 597 - -
Stsc60459g00014 606 Gene3D Phosphorylase Kinase; domain 1 369 444 - -
Stsc60459g00014 606 Gene3D Transferase(Phosphotransferase) domain 1 445 518 - -
Stsc60459g00014 606 Pfam Protein tyrosine and serine/threonine kinase 381 515 IPR001245 GO:0004672|GO:0006468
Stsc60459g00014 606 Coils Coil 241 282 - -
Stsc60459g00014 606 Gene3D Transferase(Phosphotransferase) domain 1 519 604 - -
Stsc60459g00014 606 ProSiteProfiles Protein kinase domain profile. 370 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60459g00014 606 SUPERFAMILY Protein kinase-like (PK-like) 377 577 IPR011009 -
Stsc60459g00014 606 Coils Coil 199 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60459g00014 Stsc-Chr60459 68503 71152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60459g00014 1 598 U-box Gene Family AT5G65500 37.900 5.56e-120 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Stsc60459g00014 PK_Tyr_Ser-Thr 2.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60459g00014 - - adu:107481154 964.526