Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60458g00022 ATGGGGAGAGCCACAAGGTGGTTGAAGAACTTGTTTGGGATAAGAAGAGACAAAGAACAACAACACAAAGAAGAACACTCAAATTATGGAGACCCCAGAAGCATGAAATTCTCTTCTCCATCTTCTTCTTCTGCTTCTGCTGCTGCTGCTCAGAGAAATTTAAATAATTCTAGAGTTCTGTGTCACAATCCAACTACCATTCCACCAAACATATCTCCAGCAGAAGCTGCTTGGTTGCAGTCTTTCTACAATGAGACAGAGAAGGAGCAGAACAAGCATGCCATTGCTGTTGCTGCTGCTACTGCAGCTGCAGCTGATGCAGCTGTGGCAGCAGCACAGGCTGCAGTTGCAGTGGTTAGGCTCACCAGCCATGGAAGAGGTACCATGTTTGGTGCTGGACATGAGATTTGTGCTGCCACCAAGATTCAGACAGTGTTTAGAGGCTACTTGGCAAGGAAAGCACTGAGAGCCTTAAAGGGATTGGTTAAGTTACAGGGACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACACTGCATGGAATGCAGGCACTTATTAGAGCTCAAGCCACAGTGAGGTCTCAGAAAAAATCTCAAGGATTCATGGCCACAAAGAATAATTCACATAAGTCTCAAATCCGTGCACGAAGATCCATGGAGAGATTTGATGACACTAGGAGTGAGTACACAGCTCCAACTCATAGTAGAAGGTTATCATCTTCATTTGATGCAACAATTAACAACAATAACTGTTTTGATGGTAGCCCCAAAATTGTGGAAGTGGACACTGGTATTAGGCCTAAGTCAAGGTCCCGGAGAAGCAACACATCAATGTCAGATTTTGGTGACGACCCTGCATTCCATACAATGTCCTCTCCCCTTCCAATCCCATGTTGGACGCCGGGGCGGTTGTCCATACCGGATCATTCGGATTGGGGGCTGACAGGGGAAGAGTGCAGATTCTCAACTGCACAAAGCACTCCAAGGTTTGCAACAAGCACTTGTAGTTGTGGATCAGCTGCAGCCATGACACCTAAGAGTGTGTGCAATGAGAGCTTCTTCTACGGGAATTATCCGAATTACATGGTGAGCACACAGTCTTTCAAGGCAAAGTTGAGGTCTCATAGTGCTCCAAAGCAAAGACCAGACCCAGGAGGTGCAAGGAAGAGGCTCACCCTAAATGAGATGATGGAATCTAGGAATAGTTTGAGCGGGGTTAAGATGCAGAGGTCATGCTCACAGATTCAAGAAGCCATTAACTTCAAGAATGCTGTGATGGGTAGGCTTCACACTAGGGATGCAGACAGAAACCACTTCCAAAAGAGGAGGTGGTGA 1341 0.4631 MGRATRWLKNLFGIRRDKEQQHKEEHSNYGDPRSMKFSSPSSSSASAAAAQRNLNNSRVLCHNPTTIPPNISPAEAAWLQSFYNETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGAGHEICAATKIQTVFRGYLARKALRALKGLVKLQGLVRGYLVRKQATATLHGMQALIRAQATVRSQKKSQGFMATKNNSHKSQIRARRSMERFDDTRSEYTAPTHSRRLSSSFDATINNNNCFDGSPKIVEVDTGIRPKSRSRRSNTSMSDFGDDPAFHTMSSPLPIPCWTPGRLSIPDHSDWGLTGEECRFSTAQSTPRFATSTCSCGSAAAMTPKSVCNESFFYGNYPNYMVSTQSFKAKLRSHSAPKQRPDPGGARKRLTLNEMMESRNSLSGVKMQRSCSQIQEAINFKNAVMGRLHTRDADRNHFQKRRW 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60458g00022 446 SMART iq_5 134 156 IPR000048 GO:0005515
Stsc60458g00022 446 SMART iq_5 157 178 IPR000048 GO:0005515
Stsc60458g00022 446 MobiDBLite consensus disorder prediction 215 233 - -
Stsc60458g00022 446 Pfam IQ calmodulin-binding motif 162 176 IPR000048 GO:0005515
Stsc60458g00022 446 Pfam IQ calmodulin-binding motif 137 156 IPR000048 GO:0005515
Stsc60458g00022 446 Pfam Protein of unknown function (DUF4005) 329 407 IPR025064 -
Stsc60458g00022 446 MobiDBLite consensus disorder prediction 15 31 - -
Stsc60458g00022 446 MobiDBLite consensus disorder prediction 32 49 - -
Stsc60458g00022 446 MobiDBLite consensus disorder prediction 199 238 - -
Stsc60458g00022 446 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Stsc60458g00022 446 ProSiteProfiles IQ motif profile. 138 163 IPR000048 GO:0005515
Stsc60458g00022 446 Gene3D - 136 187 - -
Stsc60458g00022 446 PANTHER IQ-DOMAIN 5-RELATED 1 406 - -
Stsc60458g00022 446 MobiDBLite consensus disorder prediction 15 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60458g00022 Stsc-Chr60458 146471 149075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60458g00022 1 410 IQD Protein Family AT3G16490 48.578 9.45e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60458g00022 - - gmx:100800892 523.472