Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60458g00018 ATGGGGTGGAAAATTAAAGAGGGCATCGAGCCCCCTCTTCCCTCATTTCTAGAAACCACTAACCCTAATACCACCAACCCTTTCTCCATCCTCCGTCACCCCTACGCCGCCATCTTCTTCTCTGTCACCGCCAGCCGTCGACAAGGGAGCCTTGAAGACCCCCAATACCCACTCTTCGTTGATGTGGTGTTGGGTAACGGCGGAGTTGAACCCACCGCCAACGTCGAGCATCCACCGCCACTGTCGAGCATCCCTGGCGCCGTCGCCGTGACGCAGCTGCTCCCACCACCACCGTCGAGCCCCTGTCCCCATCGCCTCCAGCCACCGCCGCCGCCGCGGCGTCCTACCGTCGACGGAATTGCTAGGACAGCCACCGTCTCTGTCCTGAAGTCCCACTCAACGTCTTCTCTACCAAAGGTGGTCACACTCTGGTACAAAGCTCCTGAAATTTTGCTTGGATCTCATCATTATTCTACCCCAGTGGATGTTTGGTCCCTGGGATGCATCTTCGCAGAGATGGTAAACCAGCGACCTCGGTTCCCTGGGGACTCTGATATTGATGAATTATTTAAAATATTCAGGTTAGTGTTGAATGGCTTTTTTGGTTTATGA 612 0.5474 MGWKIKEGIEPPLPSFLETTNPNTTNPFSILRHPYAAIFFSVTASRRQGSLEDPQYPLFVDVVLGNGGVEPTANVEHPPPLSSIPGAVAVTQLLPPPPSSPCPHRLQPPPPPRRPTVDGIARTATVSVLKSHSTSSLPKVVTLWYKAPEILLGSHHYSTPVDVWSLGCIFAEMVNQRPRFPGDSDIDELFKIFRLVLNGFFGL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60458g00018 203 Pfam Protein kinase domain 138 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60458g00018 203 Gene3D Transferase(Phosphotransferase) domain 1 135 196 - -
Stsc60458g00018 203 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60458g00018 203 SUPERFAMILY Protein kinase-like (PK-like) 132 195 IPR011009 -
Stsc60458g00018 203 PANTHER CELL DIVISION PROTEIN KINASE 122 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60458g00018 Stsc-Chr60458 109439 112495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60458g00018 139 196 Core Cell Cycle Gene Families AT3G48750 79.310 1.59e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Stsc60458g00018 Pkinase 5.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60458g00018 K02206 - gmx:100795755 115.161