Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60458g00017 ATGGGGTGGAAAATTAAAGAGGGCATCGAGCCCCCTCTTCCCTCATTTCTAGAAACCACTAACCCTAATACCACCAACCCTTTCTCCATCCTCCGTCACCCCTACGCCGCCATCTTCTTCTCTGTCACCGCCAGCCGTCGACAAGGGAGCCTTGAAGACCCCCAATACCCACTCTTCGTTGATGTGGTGTTGGGTAACGGCGGAGTTGAACCCACCGCCAACGTCGAGCATCCACCGCCACTGTCGAGCATCCCTGGCGCCGTCGCCGTGACGCAGCTGCTCCCACCACCACCGTCGAGCCCCTGTCCCCATCGCCTCCAGCCACCGCCGCCGCCGCGGCGTCCTACCGTCGACGGAATTGCTAGGACAGCCACCGTCTCTGTCCTGAAGTCCCACTCAACGTCTTCTCTACCAAAGGTGGTCACACTCTGGTACAAAGCTCCTGAAATTTTGCTTGGATCTCATCATTATTCTACCCCAGTGGATGTTTGGTCCCTGGGATGCATCTTCGCAGAGATGGTAAACCAGCGACCTCGGTTCCCTGGGGACTCTGATATTGATGAATTATTTAAAATATTCAGATTTATGGAGGAATGGAAGCGGGAGATCTGCAAATGA 618 0.5518 MGWKIKEGIEPPLPSFLETTNPNTTNPFSILRHPYAAIFFSVTASRRQGSLEDPQYPLFVDVVLGNGGVEPTANVEHPPPLSSIPGAVAVTQLLPPPPSSPCPHRLQPPPPPRRPTVDGIARTATVSVLKSHSTSSLPKVVTLWYKAPEILLGSHHYSTPVDVWSLGCIFAEMVNQRPRFPGDSDIDELFKIFRFMEEWKREICK 205
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc60458g00017 205 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60458g00017 205 Pfam Protein kinase domain 138 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60458g00017 205 PANTHER CELL DIVISION PROTEIN KINASE 122 194 - -
Stsc60458g00017 205 SUPERFAMILY Protein kinase-like (PK-like) 132 196 IPR011009 -
Stsc60458g00017 205 Gene3D Transferase(Phosphotransferase) domain 1 135 200 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc60458g00017 Stsc-Chr60458 109439 112495 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60458g00017 139 196 Core Cell Cycle Gene Families AT3G48750 81.034 7.05e-31 112
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Stsc60458g00017 Pkinase 1.3e-14 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60458g00017 K02206 - gmx:100795755 115.931