LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc60458g00006	ATGCAAGTTTTGGATGTTAGCTACAACACTCTCATGGGTCATGTTCCAGACACATTATCTTGTCTGCAAGACATTCAAGTCCTTAACTTGGCACATAACAAGCTTTCTGGGGAGTTATCAGATGTAATATGCTCTCTGAGAAGCCTTGCAAATTTGACTGTTGCTTACAATTTCTTTTCTGGGTTCAGCCAACAATGTTCGAGGCTTTTCTTCAGGAATGTGGGTTTTGATTTCTCACTTAACTGCATTCCTGGAAGGGACATGCAGAGACCTCAACCTGAGTGTTCTGTGATCCCAGGTGGTAGTCTAAGTTGTCTCAGAATTCCAACACCAAAGCCTCTTGTTTGTGGTTCTCTGGCTGTAACTGTAAGTGCTTCTAAGCACACTAATTCTACTTCATCATCTCCTTGA	411	0.4209	MQVLDVSYNTLMGHVPDTLSCLQDIQVLNLAHNKLSGELSDVICSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDFSLNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPKPLVCGSLAVTVSASKHTNSTSSSP	136

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc60458g00006	136	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	2	112	-	-
	Stsc60458g00006	136	Gene3D	Ribonuclease Inhibitor	1	106	IPR032675	-
	Stsc60458g00006	136	SUPERFAMILY	L domain-like	2	81	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc60458g00006	Stsc-Chr60458	55249	55659	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc60458g00006	1	80	Leucine-rich Repeat extension Gene Families	AT3G22800	34.884	5.72e-09	51.2

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc60458g00006	-		-	gsj:114407518	234.958

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