Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60458g00006 ATGCAAGTTTTGGATGTTAGCTACAACACTCTCATGGGTCATGTTCCAGACACATTATCTTGTCTGCAAGACATTCAAGTCCTTAACTTGGCACATAACAAGCTTTCTGGGGAGTTATCAGATGTAATATGCTCTCTGAGAAGCCTTGCAAATTTGACTGTTGCTTACAATTTCTTTTCTGGGTTCAGCCAACAATGTTCGAGGCTTTTCTTCAGGAATGTGGGTTTTGATTTCTCACTTAACTGCATTCCTGGAAGGGACATGCAGAGACCTCAACCTGAGTGTTCTGTGATCCCAGGTGGTAGTCTAAGTTGTCTCAGAATTCCAACACCAAAGCCTCTTGTTTGTGGTTCTCTGGCTGTAACTGTAAGTGCTTCTAAGCACACTAATTCTACTTCATCATCTCCTTGA 411 0.4209 MQVLDVSYNTLMGHVPDTLSCLQDIQVLNLAHNKLSGELSDVICSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDFSLNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPKPLVCGSLAVTVSASKHTNSTSSSP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60458g00006 136 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 112 - -
Stsc60458g00006 136 Gene3D Ribonuclease Inhibitor 1 106 IPR032675 -
Stsc60458g00006 136 SUPERFAMILY L domain-like 2 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60458g00006 Stsc-Chr60458 55249 55659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60458g00006 1 80 Leucine-rich Repeat extension Gene Families AT3G22800 34.884 5.72e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60458g00006 - - gsj:114407518 234.958