Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60456g00024 ATGGGAATTTATAATTTGCAGCAGTCTTCTCAGCAGGCTGAGGATGCTTTATCTCAAGGCATGGAAGCATTGCATCAATCGCTTTCCGAAACGCTTGCCTCGACCTCCTTAGGTCCCACCAGTTCTGGAAATGTTGCTCAGTACATGGGCCTAATGGCTATTGCAATGGGAAAACTTGCCACACTTGAGAATTTCCTTCATCAGGCTGACCTTTTGAGGCAACAAGCACTGCAACAGCTGCAACGAATCTTGGCGACGCATCAAGCTGCTCGCGCTCTCTTAGTCATAAACGATTACATCTCGCGGCTTCGGGCACTTAGTTCATTATGGCTAGCCTGCCCTAAAGAGTAG 351 0.4815 MGIYNLQQSSQQAEDALSQGMEALHQSLSETLASTSLGPTSSGNVAQYMGLMAIAMGKLATLENFLHQADLLRQQALQQLQRILATHQAARALLVINDYISRLRALSSLWLACPKE 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60456g00024 116 ProSiteProfiles DOG1 domain profile. 1 113 IPR025422 GO:0006351|GO:0043565
Stsc60456g00024 116 PANTHER TRANSCRIPTION FACTOR TGA9 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60456g00024 Stsc-Chr60456 177772 178442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60456g00024 1 116 bZIP Transcription Factor Family AT1G68640 80.172 9.15e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60456g00024 K14431 - gmx:100775783 168.703