Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60456g00022 ATGGCTGCTCTTGCATCAACTCTAAGCCTTAATCCACATAACACAACAACAAGAAACAAAGAATATCAACAAAACCATGGTTCTTCTGTTGTTGAGGAAATTAAAGGGCTTATTAGAGTTCACAAAGATGGACACATAGAACGACCTCAAGTTGTTCCATGTGTCACTTCTTCAGCTCTGAATCCAGAGCTAAACGTTACATCAACAGACATGGTCATTGACAACGTTACAAACACATGGGCACGTTTCTATCTTCCAAATCTCCACCATCACAATGATAATAAGATACCTTTGCTGGTTTATTTTCATGGTGGTGGCTTCTGCATTGGCTCAGCAGCATGGAGTTGCTACCATGATTTCCTTGCTAAGCTATCTGCTGAGGTAGGGTGCATGGTTATGTCAGTGAACTATCGATTGGCACCGGAGAATCCTCTTCCAGCACCATATGATGATGGAATGAAGGCACTAACGTGGGTGAAACAACAATTTCTATATGAATGTGATGATAGTGAATGGTGGACTAAGAAATGTAACATTTCAAGTGTGTTCTTAGGAGGTGACAGTGCAGGTGCTAACATAGCTTACAATGTTGCCATAAGGGTATCTGAATCTGAATCTTTGAGGCCTTTGAAATTGAAGGGACTTGTTCTGATACAACCTTTCTTCGGTGGAGAAGTGAGGACAGCATCAGAGAAATCCATGGCTGAATCACCTGGCTCTGCTCTTAACTTGGCAGCCTCGGATGCCTACTGGCGTCTGGCGCTGCCGCGTGGGGCGGACCGTGATCATCCATGGTGCAATCCTATGGTAGGGAAGTTGAAGAGTTTGTTGGTGCCAACGTTGGTTTGCATATCAGAGATGGATATATTGAAGGATAGGAACTTGGAGTTGTGTGATGCTCTGGCCAGAGAGGGTGTGAGAGTGGAATATACTGTCTTCAAAGGAGTTGGGCATGCCTTTCAGATTCTTAGCAAATCTCACATCTCAAAATGCACAACATATCAAATGATGTCTTGTCTCAAGTCATTCATCATGCCTCATCTCTAA 1047 0.4336 MAALASTLSLNPHNTTTRNKEYQQNHGSSVVEEIKGLIRVHKDGHIERPQVVPCVTSSALNPELNVTSTDMVIDNVTNTWARFYLPNLHHHNDNKIPLLVYFHGGGFCIGSAAWSCYHDFLAKLSAEVGCMVMSVNYRLAPENPLPAPYDDGMKALTWVKQQFLYECDDSEWWTKKCNISSVFLGGDSAGANIAYNVAIRVSESESLRPLKLKGLVLIQPFFGGEVRTASEKSMAESPGSALNLAASDAYWRLALPRGADRDHPWCNPMVGKLKSLLVPTLVCISEMDILKDRNLELCDALAREGVRVEYTVFKGVGHAFQILSKSHISKCTTYQMMSCLKSFIMPHL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60456g00022 348 MobiDBLite consensus disorder prediction 1 26 - -
Stsc60456g00022 348 PANTHER ARYLACETAMIDE DEACETYLASE 31 326 - -
Stsc60456g00022 348 Pfam alpha/beta hydrolase fold 99 321 IPR013094 GO:0016787
Stsc60456g00022 348 SUPERFAMILY alpha/beta-Hydrolases 29 324 IPR029058 -
Stsc60456g00022 348 Gene3D alpha/beta hydrolase 35 347 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60456g00022 Stsc-Chr60456 159872 160998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60456g00022 6 346 Carbohydrate Esterase AT5G16080 50.578 3.92e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60456g00022 - - vra:106771583 490.345