Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60456g00020 | ATGGGACTTCAACTCAAGAAACCAGTCATATACACTAGTATTGTAACACTATCACTTACCTCAATTACAAAACTCTTGTGCCATCAACTTTCTACACCTTTCCCTTCCTCAAATTTCATTGCTGCTGTTGCCACCCTTCTCTTTACCTTATTCATATACTTGTTCTCCTGGAAAAGGAACTCTTGTAACACTACTACTCTCCCACCAGGGCCTCTCTCTGTCCCTATATTTGGAAACTGGTTACAAGTTGGCAATGATCTCAACCATCGTCTTCTAGCTTCATACTCACAAGCCTATGGCCCAGTTTTCCTTCTCAAACTTGGCTCCAAGAACTTGGTTGTGGTCTCTGATCCAGAGCTTGCCACCCAAGTCCTCCATTCACAAGGTGTCGAATTCGGGTCTCGCCCTCGAAACGTTGTGTTTGATATCTTCACCGGAAATGGACAAGACATGGTGTTCACTGTCTATGGTGATCATTGGCGCAAGATGCGGAGGATAATGACGCTGCCATTTTTCACCAACAAAGTTGTCCAGAACTACAGCAACATGTGGGAGGAAGAGATGAATTTGGTGGTGTGTGATCTCAATGGCAATGCTGAGAAAGTGAGTAGGGAAGGGATAGTTATCAGAAGGAGGCTTCAGCTGATGCTGTATAACATCATGTATAGGATGATGTTTGATGCAAAGTTTGAGTCTCAGGAGGATCCTTTGTTCATTCAAGCTACCAAGTTTAACTCTGAGAGAAGCCGTTTGGCTCAGAGCTTTGAGTACAATTATGGAGATTTTATACCTCTTCTTAGACCATTCTTGAGGGGCTACCTCAACAAGTGCAAGGACTTGCAGACTAGGAGATTGGCATTTTTCAACAACTACTACATCGAGAAAAGGAGAAACATAATGGCTGCTAATGGAGAAAAGCACAAGATAAGCTGTGCAATTGATCACATCATAGATGCACAGATGAAGGGAGAAATAAGTGAAGAGAATGTGCTTTACATTGTAGAGAACATAAATGTTGCAGCAATAGAGACAACACTGTGGTCAATGGAGTGGGCAATAGCAGAGTTGGTCAACCATCCACATGTCCAAACAAAGATTCGTGATGAGATATCCAAAGTGCTTAAAGACCAGACAGTTACAGAATCTAACCTCCATCAACTTCCATATCTACAAGCCACAGTGAAAGAGACACTAAGACTTCACACCCCAATTCCTCTACTTGTCCCACACATGAACCTTGAGGAAGCAAATCTAGGAGGGTACAAGATCCCAAAGGAGTCAAAAGTGGTGGTGAATGCATGGTGGCTTGCAAATAACCCTGCATGGTGGAAGAACCCTCAAGAGTTTAGGCCAGAGAGGTTCTTGGAAGAGGAGAATGAGACAGAAGCAGTGGCTGGAGGGAAGGTTGATTTCAGGTTCTTGCCATTTGGTGTTGGAAGGAGGAGTTGCCCTGGGATCATTCTTGCATTGCCAATTCTGGGTTTGGTCATTGCAAAGTTGGTAACAAACTTTGACATGAAAGCTCCAAATGGAACAAACAAGATTGATGTCTCTGAAAAAGGTGGTCAATTCAGCTTGCACATTGCTAACCATTCCACTGTTCGTTTTGATCCAATTAAGTAG | 1623 | 0.4319 | MGLQLKKPVIYTSIVTLSLTSITKLLCHQLSTPFPSSNFIAAVATLLFTLFIYLFSWKRNSCNTTTLPPGPLSVPIFGNWLQVGNDLNHRLLASYSQAYGPVFLLKLGSKNLVVVSDPELATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVQNYSNMWEEEMNLVVCDLNGNAEKVSREGIVIRRRLQLMLYNIMYRMMFDAKFESQEDPLFIQATKFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQTRRLAFFNNYYIEKRRNIMAANGEKHKISCAIDHIIDAQMKGEISEENVLYIVENINVAAIETTLWSMEWAIAELVNHPHVQTKIRDEISKVLKDQTVTESNLHQLPYLQATVKETLRLHTPIPLLVPHMNLEEANLGGYKIPKESKVVVNAWWLANNPAWWKNPQEFRPERFLEEENETEAVAGGKVDFRFLPFGVGRRSCPGIILALPILGLVIAKLVTNFDMKAPNGTNKIDVSEKGGQFSLHIANHSTVRFDPIK | 540 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60456g00020 | 540 | PRINTS | P450 superfamily signature | 392 | 403 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PRINTS | P450 superfamily signature | 474 | 483 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PRINTS | P450 superfamily signature | 340 | 357 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 476 | 485 | IPR017972 | GO:0005506|GO:0016705 | |
Stsc60456g00020 | 540 | Gene3D | Cytochrome P450 | 57 | 534 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | FunFam | Trans-cinnamate 4-monooxygenase | 58 | 533 | - | - | |
Stsc60456g00020 | 540 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PRINTS | E-class P450 group I signature | 391 | 409 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PRINTS | E-class P450 group I signature | 120 | 141 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PRINTS | E-class P450 group I signature | 216 | 234 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PRINTS | E-class P450 group I signature | 349 | 375 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PRINTS | E-class P450 group I signature | 96 | 115 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PRINTS | E-class P450 group I signature | 329 | 346 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | Pfam | Cytochrome P450 | 68 | 529 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | SUPERFAMILY | Cytochrome P450 | 68 | 521 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Stsc60456g00020 | 540 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 45 | 539 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60456g00020 | Stsc-Chr60456 | 148861 | 151097 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60456g00020 | 77 | 538 | Monolignol Biosynthesis Gene Families | AT2G30490 | 64.655 | 0.0 | 639 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60456g00020 | K00487 | - | gmx:100812188 | 894.804 |