Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60454g00021 ATGGATCTTGAGTCTGTGATCTACAACAAGAACCCAATTAAGGAGCAATCATGGAAAACAGTGTTGACTTTGGCTTATCAAAGCTTGGGAGTTGTTTATGGAGACTTGAGCACTTCACCACTCTATGTGTATAAGAGCACCTTTGCTGAGGATATTCAGCATTCAGACACCAATGAAGAAATCTTTGGTGTGTTGTCCTTTGTGTTCTGGACACTCACACTCATTCCACTTCTCAAGTATGTGTTCATTGTGCTCAGAGCTGATGACAATGGTGAAGGGGGAACTTTTGCTCTCTACTCCTTGCTGTGCAGGCATGCCAGGGTGAGCCTCTTGCCTAGCACTCAGCTTGCTGATGAGGATTTAACTGAGTACACCATTGATGGAGGTGGAACTCTTCAAGATAACAAGAGGAATAATCTTGGCTGGGGATTGAAATTGAAGTCTTTGTTGGAGAAGCACAAGGTTCTCCAAAGGGTGCTTCTTGTTCTTGCCTTGATTGGAACTTGCATGGTTATTGGGGATGGTGTCCTAACACCAGCAATTTCTGTTTTTTCTGCTGTGTCTGGTTTGGAGCTTTCCATGTCTAAAGAGCAGCACAGATATGTTGAGGTTCCAGTTGCCTGCATAATACTGCTGTTTTTGTTTGCTCTTCAACATTACGGGACCCACCGTGTCGGATGCCTATTCGCACCGGTTGTGCTGACTTGGCTGCTATGCATAAGTGCTATTGGAGTTTACAATATCTTCCATTGGAACCCCCATGTTTATCAAGCTCTTTCCCCATACTACATGTTCAAATTTCTGAGGAAGACACAAAAGGGAGGGTGGATGTCTTTGGGTGGAATTCTACTGTGTATAACAGGTTCCGAAGCCATGTATGCTGATCTAGGACACTTTACACAATTGTCAATCAAGATAGCTTTCACCTTTTTGGTATATCCTTCCTTGATCCTAGCATATATGGGACAAGCTGCATATCTATCAAAGCATCATGAAATGGAAAGTGATTATCGGATTGGCTTCTATGTATCGGTACCTCGACCACTTAGATGGCCTGTTCTTGCAATTGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCAGTCATCACCGGAACTTTCTCGATAATTAAACAATGCTCGGCTTTGGGATGCTTCCCCAAAGTCAAGATCGTCCATACATCATCAAAGATTCATGGCCAGATTTACATTCCAGAGATAAACTGGAGTTTGATGCTGCTTTGCCTGGCTATTGTGGTTGGATTCCGAGATACCAAGCGCATGGGAAATGCTGCAGGGTTGGCTGTCATAACTGTCATGTTGGTGACCACTTGCCTAATGTCTCTAGTTATGATTTTATGCTGGCATAAAAGCATTTGGCTCGCCGTTTGCTTTATATTGTTCTTTGGCTCCATTGAAGCACTCTATTTCTCTGCTTCACTCATCAAGTTCCTGGAGGGTGCTTGGGTCCCCATTGCTCTCTCATTCATCTTTCTTATTGCCATGTATGTGTGGCACTATGGCACACTCAAGAAGTATGAGTTTGATGTCCAAAACAAGGTCCCCATCAACTGGCTCCTCGGTTTGGGACCCAATCTTGGAATTGTTAGAGTTAAGGGCATTGGCCTAATACACACTGAGCTAGTATCCGGGATCCCGGCGATTTTCTCGCACTTTGTTACCAATCTGCCAGCTTTCCATCAAGTTGTGATTTTCCTCTGCGTCAAATCTGTTCCGGTGCCTCATGTCAGGCCCGAAGAAAGGTTCTTAGTCGGTAGAGTCGGCCCAAAGGAGTATAGGCTCTATAGGTGCATAGCACGGTACGGATACCGTGATGTTCACAAGGATGACATGGAGTTTGAGAAGGATCTTGTTTGCAGCATAGCGGAATTCATCCGATCAGACACTTCCGAATATGGCTTAGGACTTGGGAATTTCGAGGACGATACGAAAATGACAGTTGTTGGGACCTCGGCATCAAAGTTGGAGGGCGTGAGGATGTCGGTAGACGATCAAGAAGACACTTGTCCTCAAACAGAAGGCACATCTGAGCTGAGGGTGGTTAAGTCTCCTACAATTCGGAAACGAGTGAGGTTTGTCGTACCGGATAGTCCGCAAATCGATATGGAAGCAAGGGAGGAGTTGCATGAGCTGATGGAAGCAAAGGAAGCAGGAATGGCATTCATAATGGGACACTCATATGTTAGAGCAAAAAGAGGGTCAAGCTGGATCAAGAAAGTTGTTATCAATTATGGGTATGATTTCTTGAGGAGGAATTCTAGAGGACCAACCTATGCTCTAAGTATACCTCATGCATCAACCTTAGAGGTGGGAATGATCTATCATGTGTGA 2349 0.447 MDLESVIYNKNPIKEQSWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSDTNEEIFGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVSLLPSTQLADEDLTEYTIDGGGTLQDNKRNNLGWGLKLKSLLEKHKVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPVACIILLFLFALQHYGTHRVGCLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMFKFLRKTQKGGWMSLGGILLCITGSEAMYADLGHFTQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHEMESDYRIGFYVSVPRPLRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWSLMLLCLAIVVGFRDTKRMGNAAGLAVITVMLVTTCLMSLVMILCWHKSIWLAVCFILFFGSIEALYFSASLIKFLEGAWVPIALSFIFLIAMYVWHYGTLKKYEFDVQNKVPINWLLGLGPNLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDVHKDDMEFEKDLVCSIAEFIRSDTSEYGLGLGNFEDDTKMTVVGTSASKLEGVRMSVDDQEDTCPQTEGTSELRVVKSPTIRKRVRFVVPDSPQIDMEAREELHELMEAKEAGMAFIMGHSYVRAKRGSSWIKKVVINYGYDFLRRNSRGPTYALSIPHASTLEVGMIYHV 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60454g00021 782 Pfam K+ potassium transporter 26 611 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc60454g00021 782 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 781 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc60454g00021 782 NCBIfam potassium uptake protein 24 782 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60454g00021 Stsc-Chr60454 179898 185393 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60454g00021 1 782 Inorganic Solute Cotransporters AT5G14880 77.128 0.0 1223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60454g00021 K03549 - gmx:100793387 1397.88