Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60453g00015 ATGATAACAAATGATGATACTGAAGGTGGATCAGAAACAACGGAGCAGTTTCTTTGTGAAGTTAATAAGGGGTATATTCCGAAGGTTGGAGTGACTTTTGAAACACTTGAGGAAGCTGGTTTGTTTTACAAAGAGTACGCCAAACGTGCAGGATTCTTTACAAAAATAAGGAACACAAATAAAAGTAAGTTTACTAAGGAAGCAATTAATCAACTCATAATATGCAACAGAGAAGGGAAATGGACGTCCGAAGTACCACGTGTTGAGAAGACAAACCTATATGTGGTTCTAAATGTCCAGCTCGAATTTTAA 312 0.3686 MITNDDTEGGSETTEQFLCEVNKGYIPKVGVTFETLEEAGLFYKEYAKRAGFFTKIRNTNKSKFTKEAINQLIICNREGKWTSEVPRVEKTNLYVVLNVQLEF 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60453g00015 103 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 84 - -
Stsc60453g00015 103 Pfam FAR1 DNA-binding domain 42 84 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60453g00015 Stsc-Chr60453 106097 106517 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc60453g00015 FAR1 4.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60453g00015 - - aip:110271906 88.1965