Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60452g00022 ATGGGACCTCCAGGACCACCCACTCAAATCGGTGGTGCTCCATCTGTGACGCCTTCTCTTTTGAGATCGAATTCCGGAATGTTAGGGGCTCAAGGGGGCCCCATGCCTTCACAGACTTCTTTCCCTTCTCTTGTGTCGCCACGCACTCAGTTCAACAACATGAACATTCTGGGAAACATGTCTAATGTAACTTCTATGCTGAATCAATCTTTCCCAAATGGAGTTCCAAATCCTGGTATCTCGGGTCCAGGAAATAGCCAGCGAGGTGTCGTAGATACCGGAGCCGAAACAGATCCGCTTTCAAGTGTTGGCAATGGAATGAGCTTCAGTAATTCCGCATCCTCCTTCGTACAGTCAAATATGGTGAATGCCGGTTCTTCGGTTCAAGGTCAGGGTCAACAATTTTCAAATCCTTGTAGTAACCAGCTGTTGCCAGATCAGCAGCATTCGCAACAGATGGACCCTCAAAATTTCCAACATGGTCAGCAGCCAATGCAACAGTTCTCTGCTCCTCTGAATACGCAGCAGAAACAACAGCAGCAACATTTTCAATCATTGAGAGGAGGGGTAGGTGGTATGGGACCGGTGAAGTTGGAGCCGCAGGTAAGCAATGACCAGCTTGGTCAGCAGCAGCAGCAGCAAATACAATCTTTGAGGAATCTTGCTCCAGTGAAATTGGAACCACAGCAAATTCAAACAACTCGAACTCTAGCCCAAGTGAAGATGGAGCCCCAGCATTCTGATCAACCATTATTTTTACATCACCAGCAACAGCAGCAGCAACAACAACTACAACAGCAGCAGTTCCTCCACATGTCAAGACAATCCTCTCAGGCTGCTGCTGCTCAGATGAATCTTCTGCACCAGCAGAGGCTTTTGCAATTTCAACAGCAGCAGCAGCAGCAACAACTCTTGAAAGCAATGCCTCAACAACGGCCTCAACTGCCACAACAGTTTCAACAGCAGAATATGCCCATGAGGTCTCCTGTGAAACCAGGATATGAACCCGGAATGTGTGCTAGACGGCTTACACATTACATGTATCAGCAACAGCATAGACCCGAAGATAACAATATCGAGTTCTGGAGGAAGTTTGTCGCTGAATATTTTGCTCCTAATGCCAAGAAGAAGTGGTGTCTTTCTATGTATGGAAGTGGCAGACAAACGACTGGAGTTTTCCCTCAGGATGTCTGGCACTGCGAAATATGTAATCGCAAACCTGGTCGTGGGTTCGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGCACTTTGGAAGAGCTACTTTATGTTGACATGCCCCGTGAATATCATAATTCATCTGGGCAGATTGTACTGGATTATGCAAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCCCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTAGGCGCCATGAAGAACTCATTCCTAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCGGTTGCTCAAAAATACCAGGCCTTTACTCAAAATGCTACACCAAATGTGTCTGCTCCAGAGTTGCAAAATAACTGCAATATGTTTGTTGCGTCAGCCCGTCAGTTGGCCAAAGCCTTGGAAGTTCCATTAGTAAATGATTTAGGATATACAAAGAGATATGTACGGTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACGGGGACTGGACCCATGGAGAGCTTAGCCAAATTCCCTCGGAGAACAAGCGGATCATCTGGGCTTCATAATCAAGGACAACAACATGAAGATCGATTGCAGCAGCAACCGGAGCAGCAACAGCAAATGACAGCCCATAACTCGAATGGTGATCAAAACTCAGTGCAAGCTGGTGCCATGCAAATTGCTTCCAGCAATGGTATGGTCAGTGTAAATAACACTGTCAACTCTGCATCTGCATCGACCACCACAAGCACAATTGTTGGACTTCTCCACCAGAACTCGATGAATTCTAGACAACAAAATTCAATGAACAATTCAGGCAGCCCATATGGAAGCAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCAAGCACTGTTCCGCCGGCCCAACCTAACTCATCCCCTTTCCAATCACCAACACCATCTTCATCCAATATTCCCCCACAAACATCTCACCCCACCACCTTAACGTCTGCCAATCACATAGGAGCAACAAACTCCTCGGGTAACATGTCCTTGCAACATCAGCAATCACCTCTTTCCGGTGATGCAGACCCGAGTGATGCTCAGAGCTCTGTACAGAAAATAATACACGAGATGATGATGTCCTCCCAGATGAATGGCACAGGTGGAATGGTAGGTGTTGGTTCTCTTGGGAATGACGTGAAGAATGTAAATGGTATTCTGCCTGTGAATACCAATACAGGGCTCAATGGCGGAAATGGCATGGTCAACAATGGTCCAATGAACAGTAACTCCGGAATTGGTAACTACAGCACGATGGGTATGGGTCAATCTGGCATGCCCAATGGAATGAGAGCTGCTATGGGAAATAATTCTGTCATGAATGGAAGAGGAGGAATGGCATCAATCGCCAGGGATCAAGCCATGAACCATCAGCAGGATTTGTCAAATCAACTGCTTAGCGGTCTAGGAGCGGTAAATAGTTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATAA 2751 0.458 MGPPGPPTQIGGAPSVTPSLLRSNSGMLGAQGGPMPSQTSFPSLVSPRTQFNNMNILGNMSNVTSMLNQSFPNGVPNPGISGPGNSQRGVVDTGAETDPLSSVGNGMSFSNSASSFVQSNMVNAGSSVQGQGQQFSNPCSNQLLPDQQHSQQMDPQNFQHGQQPMQQFSAPLNTQQKQQQQHFQSLRGGVGGMGPVKLEPQVSNDQLGQQQQQQIQSLRNLAPVKLEPQQIQTTRTLAQVKMEPQHSDQPLFLHHQQQQQQQQLQQQQFLHMSRQSSQAAAAQMNLLHQQRLLQFQQQQQQQQLLKAMPQQRPQLPQQFQQQNMPMRSPVKPGYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCLSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNATPNVSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTSGSSGLHNQGQQHEDRLQQQPEQQQQMTAHNSNGDQNSVQAGAMQIASSNGMVSVNNTVNSASASTTTSTIVGLLHQNSMNSRQQNSMNNSGSPYGSSSVQIPSPGSSSTVPPAQPNSSPFQSPTPSSSNIPPQTSHPTTLTSANHIGATNSSGNMSLQHQQSPLSGDADPSDAQSSVQKIIHEMMMSSQMNGTGGMVGVGSLGNDVKNVNGILPVNTNTGLNGGNGMVNNGPMNSNSGIGNYSTMGMGQSGMPNGMRAAMGNNSVMNGRGGMASIARDQAMNHQQDLSNQLLSGLGAVNSFNNLQFDWKPSP 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60452g00022 916 MobiDBLite consensus disorder prediction 125 163 - -
Stsc60452g00022 916 MobiDBLite consensus disorder prediction 1 47 - -
Stsc60452g00022 916 MobiDBLite consensus disorder prediction 685 780 - -
Stsc60452g00022 916 PANTHER LIM DOMAIN-BINDING PROTEIN 209 905 IPR029005 -
Stsc60452g00022 916 MobiDBLite consensus disorder prediction 600 640 - -
Stsc60452g00022 916 MobiDBLite consensus disorder prediction 12 47 - -
Stsc60452g00022 916 MobiDBLite consensus disorder prediction 586 640 - -
Stsc60452g00022 916 MobiDBLite consensus disorder prediction 70 106 - -
Stsc60452g00022 916 Pfam LIM-domain binding protein 342 596 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60452g00022 Stsc-Chr60452 184498 192278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60452g00022 1 912 C2H2 Transcription Factor Family AT1G43850 61.094 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60452g00022 - - gmx:100799771 1414.82