Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60452g00018 ATGTCATTAGTTAGATCTGCAGAACTTGCTCCTACACCGTATAAAAGTGCGAAGCTGTACTCGCTAAAGGAGACTGATGTTAGACCAGGCTTATCCTCCCAACTTTTTGATGCTGACAAGCATAGAAACATGCACATGACTGATACTTACTCGAGCGAGAGTTATGAAAAGTACTTCCACGAATCGCCTTCAGAAGAGCTGATAGAACCGTGTAGTTCCGGCACATATAGTCCAATTCACATTGATGGTGCCTCTTCACACCAGTTCAGATCCAGTTCAGGAGCTTCTTTGGTTGCTAACAACACTTTTGGTACCTCTTTCGTGTCCGATGCCTATCAGTCTGAGTTTGGATTGGGTTTCTCAGAAATTGGCAACTTGGATGATCAGGGTTTAATGAGATCAAGACTTAAGGCACTGGAGAGAAGATTGCTTGGTCAAAGTGATGGTGAGGAGGAGGAGGAGGAAGAGGACTTGTTTGGGACTTCTCAAAACATGGAAATCGAGCAGGATATTTCTGAATGGGCCGATTCCATTCAGAATATGCTGCTCCAAGACTCCCCAAAGGAGACTTCATCTTCAGATTCAAGTCTTAGTAGCAGCATCAGCAGCAACAAAGAAATGTCAGCAATTCCTCAAACTCCTAGGCAAATGCTCCTTGATTGTGCGGTTGCACTTTCGGAGGGAAATCAAGATATGGCATCATCTATGATCAATGATCTACGCCAAAAGGTATCGATTCAGGGAGAGCCTTCCCAAAGAATTGCAGCCTATATGGTGGAGGGTCTCGCAGCTCGCTTGGCCGAATCTGGGAAATGCATTTACAAAGCTCTGAAATGCAAGGAAGCTCCTTCTTCAGACCGTCTAGCAGCAATGCAGATACTCTTTGAGGTTTGTCCATGCTTTAAATTTGGATTTGTCGCCGCAAACAATGCGATTACAGAGGCAGTTAAAGATGCAAGAAGGGTTCATATCATAGATTTCGACATAAATCAAGGGAGTCAGTACATAAATCTGATACAAATGCTTGCTTCAAGATCAAGGAAGCCTTTCCATGTTAGATTGACTGGGGTTGATGATCCAGAGTCTGTCCAACGATCTGTTGGAGGCCTAAAGATCATAGGACAAAGACTTGAAAAACTAGCCGAAGCTCTCAATTTAGATTTCGAGTTTCATGCAGTGCCATCAAGGACTTCCCTTGTCACTCCATCAATGCTTAATTGTCGTCCGGGAGAAGCACTCGTGGTAAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGCGTTTCGACTGTTAATGAGAGAGATCAGCTCCTTCGCCTTGTGAAGAGCCTGAATCCAAAGCTTGTCACGGTCGTGGAGCAAGATGTGAACACTAACACTACCCCTTTCTTGCCAAGATTTGTTGAGGCCTACAATTACTACTCGGCTGTGTTTGAGTCGCTCGATGTTACTCTTCCAAGAGATAGTCAGGACAGGATGAATGTCGAACGCCAATGCCTGGCGAGGGACATCGTGAACATCGTGGCGTGCGAAGGCGAGGACAGGATAGAGCGGTACGAGGTTGCCGGGAAATGGAGGGCTAGAATGACAATGGCTGGGTTCACATCAACACCGATGAGCAAAAATGTGAGTGATGAGATAAGGAAACTGAATAAGATGCACTATTATGACAAGTACAATGTGAAGGAGGAGAAGGGTGCTCTTCACTTTGGTTGGGAAGACAAGAACTTGATTGTTGCTTCAGCATGGAGGTAA 1758 0.4511 MSLVRSAELAPTPYKSAKLYSLKETDVRPGLSSQLFDADKHRNMHMTDTYSSESYEKYFHESPSEELIEPCSSGTYSPIHIDGASSHQFRSSSGASLVANNTFGTSFVSDAYQSEFGLGFSEIGNLDDQGLMRSRLKALERRLLGQSDGEEEEEEEDLFGTSQNMEIEQDISEWADSIQNMLLQDSPKETSSSDSSLSSSISSNKEMSAIPQTPRQMLLDCAVALSEGNQDMASSMINDLRQKVSIQGEPSQRIAAYMVEGLAARLAESGKCIYKALKCKEAPSSDRLAAMQILFEVCPCFKFGFVAANNAITEAVKDARRVHIIDFDINQGSQYINLIQMLASRSRKPFHVRLTGVDDPESVQRSVGGLKIIGQRLEKLAEALNLDFEFHAVPSRTSLVTPSMLNCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDVTLPRDSQDRMNVERQCLARDIVNIVACEGEDRIERYEVAGKWRARMTMAGFTSTPMSKNVSDEIRKLNKMHYYDKYNVKEEKGALHFGWEDKNLIVASAWR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60452g00018 585 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 190 580 IPR005202 -
Stsc60452g00018 585 ProSiteProfiles GRAS family profile. 205 585 IPR005202 -
Stsc60452g00018 585 MobiDBLite consensus disorder prediction 185 209 - -
Stsc60452g00018 585 Pfam GRAS domain family 215 585 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60452g00018 Stsc-Chr60452 167557 169943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60452g00018 1 585 GRAS Transcription Factor Family AT1G21450 59.160 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc60452g00018 GRAS 1.5e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60452g00018 - - gmx:100798897 879.396