Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60450g00014 ATGGATGGCACAGCAGAGGCAGAGGCAGATAGAGAGAAGATCTACGTGGCCCTTGGCAATAATGTCATTGAAGGAGTTAACACTTTGGCTTGGACTCTCAGTAAATGGCACTCACATTCAATTACCATAATCATTCTCCATCTCAACTATAATAACACTTCCAACCATCTTTCAACACTGCTTGGGAATTTCCCTGAAGGCATTGCTTGTGATGTTAAAATGGAAAGAATCCGGAAAAGTAAACAAGAGAGGATGGACAAGATGCTTTCCAAGTATATGTCTTTCTGTGGCAATGTACCAGCTGAAATACTAGACATAGAGCAATTTGATGAACCTGTTCAAAAGCGCACCATAGACTTGATTTATGGTCTTGGAATTACCAAATTGATCATGGCTTTCTCATTCATGAAGGCTTCCATGAAACAAAAAGATGCAATGGATGCAATGTTGTATGTTCATAAGCAGAAGCCTGGGTTCTGTGAACTGTTCTTTGTGCGTGAAGGGATACAAGTGTTCCTCCGAGAGAAGGATAATGATGAGACATTTATGGAGGATGATAATGGTGTCACAGTTGCAAGAATGAAAGATAATAATAAGTCAATTGCCAAATGGTTCCTACAAAAAATCAAGTTCAGTGATAATAATAAAATCAATGATTCCAATCCTACAAGTTCTTGTTCGTCCTCCGAGTTCCCTCTTATTAACCAAAACCAGTGGAAATCTTATTTCCCAGAGATTGACAATTATTATCAGGAATTGCTGTCTTTGAATTTGGAGGAAGAAAACCACAACTCAGATTTTCCACCTACTCAATATGAGAAACTCAGAGAGGAACTGAATGAAGCATACAACAGGATCCAGACAAAGAGAAAAGAAGCCAAGCAAAATATAGAAAGGCATGAAAAGGCTGAATGGGCTACTTGGTTATGCAACCGTCGGGAAGAAGAGCTTGAAAATCGAATAAAGGAAGAAGTAGCTGCAAGGGAAGAACTAAAGAAGGAACTGGAGAGAAATAAGGAAGTAGTAGATCAAATAAGTGCTGAAGTTGAAGAGAGTAAGAAAATGCTAAGTTCAATGGGAGAGGTGCAATCTGAGCTAGTAAACAAGCTTGAGAGTTTTGCATTGCAAGTGTCAGAAGCAGAAAATCAACAAAGAAAGGTAATAGAAGTGAAAATACAGATTCTTGGGGAGATTGAGGAGTTGAGGAGACAAAGAATAATGGGGAGTTCAAGGAAGGTGGTGGCAGAGGCAGAGAACAATAATGGTTGTTGTGTTTTCAGGGAGTACAGAGAGCAGGAGATTGTGGTGGCCACACACAACTTTTGGGATCAGTTGAGGATGAAACATGATGATGGAGGATGGAGTGATGTGTATAAAGGAAGGACCAATGGTTGCACAGTTGCAATCAAGATGCTCAATTCTCTTCCTGCTTTCTCCCAACTTCATAGTTTCTTAGCTAAGGTGAGGATTCTTGCCAGTATTCGGCACCCACATCTAGTTGGTATGTTAGGCTTCTGCTGTGAGCCCAGATGCATAATTCTAGAATACATGGACAGTGGGAGCTTAGGAGACTTTCTATATTGTAGAGTAAGAAGACGGTCCTTAGGGTGGCATGATCGGATGAGGATAGCCGTAGAAATCACAGGTTTTGGTCTTCATGGATGTGGTGAAGAATGCAATGTTGCATCTGATGTAAAGGCCATAGGGGTTTTGTTGATGCAGCTTCTGACTGGAAAAAGAAATTTTATGGGTATGGTTAGGGAGGATATTTTGGATAGAAGTGGTGGGAAATGGCCATTGGATGTAGCAAAGGAAGTTGAGAACTTAGCAAAGAGGTGCATGTCCAATGAAGACATGAAAATTGCAAGGATCTTGGAGGAACTCAATGAGATTAAGAGAAAGCATGATAATATAGCTTGGACAGGAGTTGATTAG 1935 0.4041 MDGTAEAEADREKIYVALGNNVIEGVNTLAWTLSKWHSHSITIIILHLNYNNTSNHLSTLLGNFPEGIACDVKMERIRKSKQERMDKMLSKYMSFCGNVPAEILDIEQFDEPVQKRTIDLIYGLGITKLIMAFSFMKASMKQKDAMDAMLYVHKQKPGFCELFFVREGIQVFLREKDNDETFMEDDNGVTVARMKDNNKSIAKWFLQKIKFSDNNKINDSNPTSSCSSSEFPLINQNQWKSYFPEIDNYYQELLSLNLEEENHNSDFPPTQYEKLREELNEAYNRIQTKRKEAKQNIERHEKAEWATWLCNRREEELENRIKEEVAAREELKKELERNKEVVDQISAEVEESKKMLSSMGEVQSELVNKLESFALQVSEAENQQRKVIEVKIQILGEIEELRRQRIMGSSRKVVAEAENNNGCCVFREYREQEIVVATHNFWDQLRMKHDDGGWSDVYKGRTNGCTVAIKMLNSLPAFSQLHSFLAKVRILASIRHPHLVGMLGFCCEPRCIILEYMDSGSLGDFLYCRVRRRSLGWHDRMRIAVEITGFGLHGCGEECNVASDVKAIGVLLMQLLTGKRNFMGMVREDILDRSGGKWPLDVAKEVENLAKRCMSNEDMKIARILEELNEIKRKHDNIAWTGVD 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60450g00014 644 Coils Coil 272 303 - -
Stsc60450g00014 644 Coils Coil 363 383 - -
Stsc60450g00014 644 PANTHER OS02G0152300 PROTEIN 558 635 - -
Stsc60450g00014 644 Gene3D Transferase(Phosphotransferase) domain 1 553 642 - -
Stsc60450g00014 644 Gene3D Transferase(Phosphotransferase) domain 1 433 552 - -
Stsc60450g00014 644 Coils Coil 614 634 - -
Stsc60450g00014 644 Coils Coil 314 352 - -
Stsc60450g00014 644 ProSiteProfiles Protein kinase domain profile. 443 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60450g00014 644 Pfam Protein tyrosine and serine/threonine kinase 452 547 IPR001245 GO:0004672|GO:0006468
Stsc60450g00014 644 SUPERFAMILY Protein kinase-like (PK-like) 448 615 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60450g00014 Stsc-Chr60450 68413 71201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60450g00014 5 642 U-box Gene Family AT5G65500 34.072 3.97e-111 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Stsc60450g00014 PK_Tyr_Ser-Thr 1.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60450g00014 - - adu:107481154 992.26