Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60450g00007 ATGATTTATCAAAGATCAATGATTATCACAATACACATATTTTACAACAATATGATCACTGGTGAAAATTCATATAGCAAACTCTCTTTGGTTGACTTGGCGGGAAGTGAAGGTTCAATAACAGAAGATGATAGTGGTGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCAGCATTGGGGGATGTTTTATCTTCTTTAACATCGAAGAAGGACGTCATTCCTTACGAAAATTCTGTGTTGACAAACCTCCTTGCAGATTCACTTGGGGGGAGTTCAAAAACCCTGATGATTGTTAATGTGTGTCCAAACTTTTCAAACTTATCTGAGACATTGTCATCTCTCAATTTCACTGCCAGAGCTCGAAATGCTGTATTAAGTCTTGGGAACCGAGATACAATAAAGAAGTGGAGAGACATTGCAAATGATGCCCGTAAGGAGTTATATGATAATGAAAAAGAAATTCATGACCTGAAGCAAGAGGGTCTGCAGCTCAAGCAAGCACTTAAAGATGCAAATGATCAGTGTGTTTTACTCTTCAATGAAGTACAAAAGGCATGGAAAGTTTCTTCTGCATTGCAGACAGATTTGAAGTCAGAGCATATTTTGCTGTCAGATAAACTCAAGATAGAGAAAGAACAAAATACTCAGCTTCGAAGTCAAGTTGCTCAACTGTTAGAGTTGGAGCAAGATCAAAAGTTGCAGATACAACAGCAAGATTCCACAATCCAAACTTTGCAGGATAAAATTAGAACCCTTGAAACTCAACTCAATGAAGCTGTTAGGTTGAGCAAAACTGGGTCAACTTCTGCCTCAGAGCCAGAATCTGAAGCTCTGTCCGATACCAGGCCAACTGCAGATGGTGTGGATTCTTCTGCAGTAACCAAAAAACTGGAAGAGGAACTCAAGAAACGTGACACTCTTATTGAGAGGTTGCATGAGGAAAATGAAAAACTGTTTGATAGATTAACTCAGAAAACATCTGCTGCTCAACCATCACAGCTGTCAAGTCCATTATCTCAGGGATCAGCTAATGTTCAGCCTCAAGATATTGGGAGAAATGGAACCAGCAACAATGCAAGAGCTCGTTCTTTGGATGTCCCTCCTTCATCTTTCGCCACTGATAAGAGTGATGGCACAGTTGCTTTAGTTAAATCAGGCTCCGAAGTAGTTAAGACTACCCCAGCGGGTGAATATCTTACTGCCGCCTTGAATGACTTTGATCCAGATCAATATGATGGGCATGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTGCTTGCTGCTGTCATCAAAGCTGGTGCCTCTCGAGAGCATGAGATACTTGCTGAAATTAGGGATGCTGTTTTCTCATTTATCAGGAAAATGGAACCAAAGCGAGTAATGGACACCATGCTTGTTTCCCGTGTTAGAATCCTGTATATAAGATCTTTGCTTGCCAGATCTCCAGAGTTGCAATCAATTAAGGTCTTGCCAGTTGAGTGCTTTCTTGAGAAGCCTAATACTGGACGCAGCAGAAGTTCCAGCCGGGCGAGTAGTCCTGGAAGGTCTCCTGTGCAATATGTTGATGAGCAGGTCCAAGGATTTAAAGTGAATCTAAAGCCAGATAGGAAGTCCAAATTTTCGTCTGTTGTGTTGAAGATACGTGGGATTGATGAGGACATATGGAGGCAGCAGGTAACTGGTGGAAAGCTTAGGGAAATTACCGAGGAAGCCAAAAGTTTTGCTATTGGAAACAAGGCTCTTGCTGCGCTTTTTGTACATACTCCAGCTGGTGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCAGAGAATTTTGACTTCCTATCCGTCACTGCAAATGATGCTTCGGGGGGATCAACCGGTCAGTTGGAACTTCTTTCAACTGCAATAATGGATGGTTGGACAGCTGGACTTGGTGCTGCTATGCCTCCCCAGACTGATGCCCTTGGCCAGCTATTATTTGAATATTCAAAACGTGTCTATTCTTCTCAACTACAACACTTGAAGGATATTGCTGGCACCTTGGCAATGGAAGAGGCTGAAGATGCAGCACAAGTAGCGAAGCTGCGTTCAGCTCTAGAGTCTGTTGATCACAAAAGAAGAAAGATTCTGCAGCAGATGAGAAGTGATGTGGCTTTATTGACATTGGAAAAGGGCGGTTCATCTATTCAAAATCCTTCTACTGCAGCTGAGGATGCACGATTAGCATCTCTCATTTCTCTTGATGGCATATTAAAGCGAGTCAAGGATATAACAAAACTTTCTTCTGTGAACATCTTGAGCAAAAGTAAGAAAAGAACAATGCTGGCTTCTCTTGACGAACTGACTGAACAGATGCCTTCACTCCTTGAGGTTGACCATCCATGTGCTCAGAGGAACATAGCAGAAGTTCGCCGAATGGTTGAGTCAATTCCGGAAGAAGACGACAGTGTTCAAGATATACAACATGCTCGTAGGTTATCAATGGATCCTGGCTCTGGATCCGAAATTGATGTAGCACAGTGGAATGTGCTACAATTCAATACAGGCACTTCCTCACCATTTATAATCAAATGTGGAGCAAACTCTAGTTCAGAACTAGTCATTAAAGCCGATGCACGAGTTCAGGAACCAAAAGGTGGTGAGATTGTGAGGGTTGCCCCTAGACCATACATACTGGAAAATATGAGTTTGGATGAAATGAAACAGATATTTTCAGAACTACCTGAGTCTCTAAGCTTGCTTGCCCTAGCAAGAACAGCAGACGGTACGCGAGCCCGTTATTCTAGATTATATAAGACCTTGGCTTCGAAGGTTCCATCACTAAAGGATCTGGTCAATGAGCTTGAAAAAGGAGCAGGGAGAACGTAA 2868 0.425 MIYQRSMIITIHIFYNNMITGENSYSKLSLVDLAGSEGSITEDDSGERVTDLLHVMKSLSALGDVLSSLTSKKDVIPYENSVLTNLLADSLGGSSKTLMIVNVCPNFSNLSETLSSLNFTARARNAVLSLGNRDTIKKWRDIANDARKELYDNEKEIHDLKQEGLQLKQALKDANDQCVLLFNEVQKAWKVSSALQTDLKSEHILLSDKLKIEKEQNTQLRSQVAQLLELEQDQKLQIQQQDSTIQTLQDKIRTLETQLNEAVRLSKTGSTSASEPESEALSDTRPTADGVDSSAVTKKLEEELKKRDTLIERLHEENEKLFDRLTQKTSAAQPSQLSSPLSQGSANVQPQDIGRNGTSNNARARSLDVPPSSFATDKSDGTVALVKSGSEVVKTTPAGEYLTAALNDFDPDQYDGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKPNTGRSRSSSRASSPGRSPVQYVDEQVQGFKVNLKPDRKSKFSSVVLKIRGIDEDIWRQQVTGGKLREITEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAENFDFLSVTANDASGGSTGQLELLSTAIMDGWTAGLGAAMPPQTDALGQLLFEYSKRVYSSQLQHLKDIAGTLAMEEAEDAAQVAKLRSALESVDHKRRKILQQMRSDVALLTLEKGGSSIQNPSTAAEDARLASLISLDGILKRVKDITKLSSVNILSKSKKRTMLASLDELTEQMPSLLEVDHPCAQRNIAEVRRMVESIPEEDDSVQDIQHARRLSMDPGSGSEIDVAQWNVLQFNTGTSSPFIIKCGANSSSELVIKADARVQEPKGGEIVRVAPRPYILENMSLDEMKQIFSELPESLSLLALARTADGTRARYSRLYKTLASKVPSLKDLVNELEKGAGRT 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60450g00007 955 Coils Coil 297 331 - -
Stsc60450g00007 955 Coils Coil 210 230 - -
Stsc60450g00007 955 ProSitePatterns Kinesin motor domain signature. 26 37 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc60450g00007 955 MobiDBLite consensus disorder prediction 327 375 - -
Stsc60450g00007 955 SMART kinesin_4 4 134 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60450g00007 955 Pfam Kinesin motor domain 7 125 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60450g00007 955 Coils Coil 143 177 - -
Stsc60450g00007 955 Coils Coil 238 265 - -
Stsc60450g00007 955 MobiDBLite consensus disorder prediction 506 524 - -
Stsc60450g00007 955 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 168 IPR027417 -
Stsc60450g00007 955 PANTHER KINESIN-LIKE PROTEIN KLP-3 553 865 IPR027640 GO:0003777|GO:0007018
Stsc60450g00007 955 ProSiteProfiles Kinesin motor domain profile. 1 126 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60450g00007 955 MobiDBLite consensus disorder prediction 263 296 - -
Stsc60450g00007 955 MobiDBLite consensus disorder prediction 263 291 - -
Stsc60450g00007 955 MobiDBLite consensus disorder prediction 505 524 - -
Stsc60450g00007 955 Gene3D Kinesin motor domain 4 177 IPR036961 -
Stsc60450g00007 955 PRINTS Kinesin heavy chain signature 27 45 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc60450g00007 955 PRINTS Kinesin heavy chain signature 76 97 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60450g00007 Stsc-Chr60450 20571 28425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60450g00007 7 127 Calmodulin-binding Proteins AT5G65930 45.455 1.39e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60450g00007 - - gmx:100796816 1543.48