LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc60450g00006	ATGCAAGCAAACTCGGGCGGGTCTGGATCAGGGTTCGAACCCGAAGCCCTTATCCGCTCTTGCACGGAGCGTCTCTCACGCCGCGACTTCACTGGCGCCCGCGAGTTTGCCCACCGGATCAATAAGTCCGACCCGGACATCTCCCTCCGGGTCGACCAGATCCTCGCTGTCGCCGACGTCCTCACCGCTGCCCAGCCCCGCCCCGGGAGTTGCCACCCTGACTGGCCCGCCGTTCTCCAGCTCCGCCCCGCCGACGCCTCCAACCGTGACCTCGCGCGGCGGCAGTTTAAGTCACTCGCCCGCCTCCTTGACCGGAGCAACAAGAAGCTTCCCTTCGCTGACGACGCGCTGATGCGCGTGCGCGAGGCTTGGCTCGTCCTCTCCAACAGACACCGCAACGGCGGCGGCAAGGACGAAGGTCCGTCGCAGGCCGGTGGTGGCGACGCGTCAGGGGAGAGCGTGGCAACTACATTCTGGACTATGTGCCCTTATTGCTGGTATCTGCATGAGTACGAGAAGAAGTATGAGGGTTGCGCCTTCCAGTGTGAGACTTGCCGGAGGGCGTTTCACGGCGTGGCTGTGAAGCCACCGTCGCCGGAGAGGATGGTGGAGGGGAAGGAGCAGTACTATTGTTACAATGTGAGCTTTCCGTTGAGGTATCCAATGGGGGACGAACGGTGCCGTTTTGATACTGATGATGGAATTAGGGATTGGTGTGAAAGTGGGGTTCTTGAGAGGAATGGAATGAAGGGATTTCAGGCAAATGGGAAGAGAAGAATGAGAATAAAAACTACGGCAAAGAGGGTCAAAATGAAGTCTTTTGATCCCATAAATGACTCTGCTTAA	846	0.5863	MQANSGGSGSGFEPEALIRSCTERLSRRDFTGAREFAHRINKSDPDISLRVDQILAVADVLTAAQPRPGSCHPDWPAVLQLRPADASNRDLARRQFKSLARLLDRSNKKLPFADDALMRVREAWLVLSNRHRNGGGKDEGPSQAGGGDASGESVATTFWTMCPYCWYLHEYEKKYEGCAFQCETCRRAFHGVAVKPPSPERMVEGKEQYYCYNVSFPLRYPMGDERCRFDTDDGIRDWCESGVLERNGMKGFQANGKRRMRIKTTAKRVKMKSFDPINDSA	281

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc60450g00006	281	MobiDBLite	consensus disorder prediction	131	150	-	-
	Stsc60450g00006	281	PANTHER	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN	11	224	-	-
	Stsc60450g00006	281	SUPERFAMILY	FYVE/PHD zinc finger	152	212	IPR011011	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc60450g00006	Stsc-Chr60450	18794	20101	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc60450g00006	13	220	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT5G64360	33.745	9.05e-34	126

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc60450g00006	-		-	aip:107631364	517.694