Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60448g00020 ATGGCTAATAAGGCAGTTCATTCATTAGGGTTGTTGTGTGTGCTACTTTTGGTGCATAAGGGTGCTGATGCCTATGATTTCATAGTTGGAGGCCAAAAGGGTTGGAGTGTTCCAAGTGATTCCAATTTCAATCCTTTCAATGCATGGGCTGAAAAGAGCCGTTTTCAAATTGGAGACTCTCTAGTTTTCAACTACCAATCAGGGCAAGACTCAGTGCTACAAGTGAAGAGCGAAGACTACGCAAGCTGCAACACAAACTCACCATACGCAAAGTTCTCAGACGGCCACACAGTCTTCAAGCTAACACAATCAGGCCCATACTTCTTCATCAGCGGTAACAAAGATAACTGCCTCAAGAACGAGAAGCTAACCGTCATTGTAATGGCTGACAGATCCAACCGTACCTCATCATCCACTAATAACACTAACTCAAGCCCTCCCACTTCTTCTCCGCCTTCACCACAGCCTTCGGCACCTTCGCCGGCACCAACCGGCCAAGGAGCTCAGTCTTCTCCGCCACCTGCTGGAACAGTGGAAACTAACCCAACCCCGGCACCTTCCAGTGATGAAGGACGTCATCCTCGTAACGCGGCCACCTCCGCCTTCGTCAACTTTGCTGGTTCAGTTGGAGCTATAGTCATGGCTTCTTCAGCTCTCATGTTATCTCTCTAG 672 0.4866 MANKAVHSLGLLCVLLLVHKGADAYDFIVGGQKGWSVPSDSNFNPFNAWAEKSRFQIGDSLVFNYQSGQDSVLQVKSEDYASCNTNSPYAKFSDGHTVFKLTQSGPYFFISGNKDNCLKNEKLTVIVMADRSNRTSSSTNNTNSSPPTSSPPSPQPSAPSPAPTGQGAQSSPPPAGTVETNPTPAPSSDEGRHPRNAATSAFVNFAGSVGAIVMASSALMLSL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60448g00020 223 Gene3D - 25 141 IPR008972 -
Stsc60448g00020 223 MobiDBLite consensus disorder prediction 162 187 - -
Stsc60448g00020 223 MobiDBLite consensus disorder prediction 130 146 - -
Stsc60448g00020 223 MobiDBLite consensus disorder prediction 147 161 - -
Stsc60448g00020 223 CDD OsENODL1_like 25 128 IPR041846 -
Stsc60448g00020 223 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Stsc60448g00020 223 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Stsc60448g00020 223 MobiDBLite consensus disorder prediction 130 196 - -
Stsc60448g00020 223 PANTHER BLUE COPPER PROTEIN 25 147 IPR039391 GO:0009055
Stsc60448g00020 223 FunFam Early nodulin-like protein 9 25 139 - -
Stsc60448g00020 223 Pfam Plastocyanin-like domain 35 119 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60448g00020 Stsc-Chr60448 182984 184618 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60448g00020 9 200 Phytocyanin Superfamily AT3G20570 54.688 1.93e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60448g00020 - - gmx:100792916 265.774