Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc60448g00005 | ATGGCCATGCTCCGAAAATTGTTCTTTCGAAAACCTCCCGATGGCCTTCTCGAGATCTGTGAACGCGTCTACGTATTTGATTGCTGCTTCACCACTGATGCTTGGAGCGAAGAGAATTACAAAGTTTACATTGATGGAATAGTTGGTCATCTTAAGGAGAACGTGCCCGATGCTTCAATTCTTGTTTTCAATTTCCGCGAGGAAGAGACGAAGAGCGTTATGGCAAACATATTATCTGAGTATGACATTACTATTATGGACTATCCGCGCCACTATGAAGGTTGCCCTGTGCTCAAGATGGAGCTCATTCACCATTTCTTAAGGTCTGGTGAGAGTTGGCTCTCTCTTGGGCAGCACAATGTGCTTTTGATGCATTGTGAACGCGGTGGTTGGCCTGTTTTGGCCTTCATGCTAGCAGCATTATTGATTTATCGGAAGCTTTACACCGGGGAGGGACGGACTTTGGATATGGTGTATAAGCAGTCTCCCCGCGAGCTTTTGCATTTGCTGACACCCTTGAATCCAATCCCTTCGCAGCTGAGGTATCTGCAGTATGTTTCCAGAAGGAATGTGGCCATAGATTGGCCACCGTTGGACAGGGCTCTCATGTTGGATTGCATTATCCTTAGATTCATCCCGAATTTCGATGGACAAGGTGGTTGTCATCCCTTGTTTAGAATCTTTGGACAGGACCCTTCTAGTGGAGACAAGAATCCGAAAATGTTGTACTCAACTCCCAAGAGAAGCAAGAATATCCGGTCTTACAAGCAGGGAGAGTGTGAACTAGTTAAGATTGATATCAGTTGCCATATTCAAGGTGATGTAGTGATTGAGGGCATTAACTTGGACCGTGATATGGAGCAAGAAATGATGATGTTCCGAGTAATGTTCAACACGGCTTTTGTTAGATCTAATATCATGATGCTTAACCGGGATGAAGTTGACATTTTATGGGATGCTAAAGATCAATTTCCAAAGGATTTCAGAGCTGAGATCCTTTTCTCCGAAATGGATGCTGCTGCAGCTGTTATGGTGGATCGCACCTCATGCTTCGAGGAGAAGGAAGGACTGCCAGTGGAAGCATTTGCCAAGGTTCAAGAGATCTTTAACTATGTGGACTGGTTGGACACCGATGCAGATGCTGCACTAAATGTTCTCCAACAGATGACTGCTTCGGCTATCATTAACGACAAGTTGGATACAGTTCAAGAAGCATACCTTAAAATGCCTCGGGGGAAAATGAATGAAGCGATAGAGTATTCTCCAAGTAAGCAATCCCCGGACAATGAGAAGAGTAAAAAAGGAGATATGGCCAGTAAAGTTGATGCTATTCCACAGGCATCTGATATTTTCTGCTTGCCTGGTTCTGTGGATGCTTCCTTTTCCCCAGAAACACCTCCTCTACGGCATGCCTCAAATAGATTTGGCAAAGGATTTCATGATTCTCCTCCCCATACAGAAGTCAGTCATCAACCTGTTATTGATGAAACTGAAGCCCAATTGCAAGATAGAAGTCAGTCATCTATTTCTAGGTTTGCACCTGGGAGTCAATCTTCTTCTACCTCTTGTAGCAAGTCACCAACTGATACCATCACTCAGACTTCAAAGTCAGGCACTACTTCAGTTCAGCCACCCCCTGCACTTTCTCCCAGAACACCGTTGAAGGAAATTCGACCTGTAAAAGCAAGACCCGAGTCATCCTCTTCAAAACCGCCTACACCACCTCCTCCTCCTACTCCTCCTCCAAAGGATCATAAACCAGCTTCAGTTAAACCTCCTCCACCTCCACCACCTCCTTCAAAGAATGAACCAGATGTTAGAGATGGACCCTCTACTCCTCCACCACCTCCCTTAAAGGAAGAGCCACAGGTGAAAGCTGCACCCCCTCCTCCTCCTCCTCCTCCTCCTCCACCTCTTGCAAAGGATGATTCACAGGTTAGAGCTAGACCCCCTCCACCACCACCACCTCCTCCTTGTCTCTCTGCCAAAGCTGAAGGTCCTAGTACAGCATCAACAGCGCCGCCGCCACCACCGCCGCCGCCATCTGCAACACCTACCTCAAATATGCCTAATCCTTCTGTCCCAGCTGCTCCTCCACCTCCTTCTGCACCAGCTGCTCCACCACCTCCTTCTCCCTTAGGCAAAGGGGGTTCAAAATCAGGCCAAGGTTTTCTAGGATCTCTTTCTGCAGCTGGTGATGGATCTAGCTCAAAGGGACGGATGCTATCACGTACTATTAATTCAAAGAATAATGCCAAAAAGCTGAAGCCATTGCATTGGTTGAAACTGTCTAGGGCTGTGCAAGGAAGTTTGTGGGCTGAGACACAGAAATCGGGTGAAGCTTCCAAAGCCCCAGAGATTGACATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGCTCAACCAAGAAATCAAATGCCCAAAGCGCAGCTGCTCCTAAATCTGATAAAGTGCAACTGATTGAGCATAGGCGAGCATACAATTGTGAAATCATGCTTTCAAAAGTGAAGGTGCCACTGCATGATTTAATGAGCTCAGTGCTAAAACTGGAAGAGTCAGCACTAGACATTGATCAGGTTGAGAATATCATAAAGTTTTGTCCTACAAAAGAAGAGATGGAACAACTTAAGGGTTATACAGGTGAAAAGGAGAAGTTAGGGAGGTGTGAACAGTTCTTCCTAGAGTTGATGCAAGTACCACGGGTAGAATCCAAGCTCAGAGTTTTTGCATTTAAGATTCAGTTCCAAAGTCAGGTTGCTGACCTTCGAAAAAACCTGAATGTTGTGAATGCTGCAGCAGATGAGATCAAAAGCTCTGTCAAATTTAAGAGAGTTATGCAAACCATACTTTCCCTGGGCAATGCTTTGAACCAGGGAACTGCCAGGGGCTCTGCCATTGGATTCAGATTGGATAGTCTTCTGAAGCTTACTGAAACACGTGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGCAAGGTTCTGGCTGACAAACTACCAGATGTTTTAGACTTCTCCAAGGATCTTGCCAACCTAGAGCCAGCAGCAAAGATCCAATTGAAGATTCTGGCAGAGGAGATGCAGGCTATAAGCAAAGGATTAGAGAAAGTTGTGCAGGAATTATCACTGTCTGAAAATGATGGTCCAATGTCAGAAACTTTCCGCAAGAATTTGAAAGAGTTCCTCTCTCATGCTGAAGCTGAAGTCCGTTCATTGGCTTCATTATATTCTCGTGTGGGTAGGAATGTTGACACATTGATTCTTTATTTTGGGGAAGATCCATCAAGGTGCCCTTTTGAGCAAGTTGTCACGACTTTGCACAACTTCACTGGAATGTTCAACAAATCACATGAAGAAAACAGCAAGCAGCTAGAGCTTGAAATGAAGAAAACAGCCGACGGTGAGAAAAAGAAGTGCGAACGAGAAAAGATAATACCGGCAGCAATCCGGACCGGCAACGTCCAATGA | 3483 | 0.4556 | MAMLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWSEENYKVYIDGIVGHLKENVPDASILVFNFREEETKSVMANILSEYDITIMDYPRHYEGCPVLKMELIHHFLRSGESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKLYTGEGRTLDMVYKQSPRELLHLLTPLNPIPSQLRYLQYVSRRNVAIDWPPLDRALMLDCIILRFIPNFDGQGGCHPLFRIFGQDPSSGDKNPKMLYSTPKRSKNIRSYKQGECELVKIDISCHIQGDVVIEGINLDRDMEQEMMMFRVMFNTAFVRSNIMMLNRDEVDILWDAKDQFPKDFRAEILFSEMDAAAAVMVDRTSCFEEKEGLPVEAFAKVQEIFNYVDWLDTDADAALNVLQQMTASAIINDKLDTVQEAYLKMPRGKMNEAIEYSPSKQSPDNEKSKKGDMASKVDAIPQASDIFCLPGSVDASFSPETPPLRHASNRFGKGFHDSPPHTEVSHQPVIDETEAQLQDRSQSSISRFAPGSQSSSTSCSKSPTDTITQTSKSGTTSVQPPPALSPRTPLKEIRPVKARPESSSSKPPTPPPPPTPPPKDHKPASVKPPPPPPPPSKNEPDVRDGPSTPPPPPLKEEPQVKAAPPPPPPPPPPPLAKDDSQVRARPPPPPPPPPCLSAKAEGPSTASTAPPPPPPPPSATPTSNMPNPSVPAAPPPPSAPAAPPPPSPLGKGGSKSGQGFLGSLSAAGDGSSSKGRMLSRTINSKNNAKKLKPLHWLKLSRAVQGSLWAETQKSGEASKAPEIDMSELESLFSAAVPSSGSTKKSNAQSAAAPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLKLEESALDIDQVENIIKFCPTKEEMEQLKGYTGEKEKLGRCEQFFLELMQVPRVESKLRVFAFKIQFQSQVADLRKNLNVVNAAADEIKSSVKFKRVMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPDVLDFSKDLANLEPAAKIQLKILAEEMQAISKGLEKVVQELSLSENDGPMSETFRKNLKEFLSHAEAEVRSLASLYSRVGRNVDTLILYFGEDPSRCPFEQVVTTLHNFTGMFNKSHEENSKQLELEMKKTADGEKKKCEREKIIPAAIRTGNVQ | 1160 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc60448g00005 | 1160 | MobiDBLite | consensus disorder prediction | 670 | 714 | - | - | |
| Stsc60448g00005 | 1160 | PANTHER | FORMIN-J | 1 | 638 | - | - | |
| Stsc60448g00005 | 1160 | MobiDBLite | consensus disorder prediction | 416 | 438 | - | - | |
| Stsc60448g00005 | 1160 | MobiDBLite | consensus disorder prediction | 798 | 820 | - | - | |
| Stsc60448g00005 | 1160 | SMART | it6_source | 745 | 1155 | IPR015425 | - | |
| Stsc60448g00005 | 1160 | Gene3D | - | 199 | 340 | - | - | |
| Stsc60448g00005 | 1160 | Gene3D | Protein tyrosine phosphatase superfamily | 15 | 198 | IPR029021 | - | |
| Stsc60448g00005 | 1160 | MobiDBLite | consensus disorder prediction | 493 | 545 | - | - | |
| Stsc60448g00005 | 1160 | Pfam | Formin Homology 2 Domain | 749 | 1118 | IPR015425 | - | |
| Stsc60448g00005 | 1160 | MobiDBLite | consensus disorder prediction | 798 | 817 | - | - |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc60448g00005 | - | - | aprc:113848377 | 1562.74 |
Showing 1 to 1 of 1 entries