Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60448g00001 | ATGGGTTTGGGAGTGTTTGGCACTGTTCTGATTTTGGGACTCTTGTTCAAGCATTTGGCTTCTCAGCAACCAAACACTGATGAGTTCTATGTGTTTGAGTTCTTGAAGAAAATGGCTTCCAATTCTTCTTCTTCTTTTTCCTCCTCACAAGCCTCAGCTTCAGTTTGTTCATGCCAAGGAGTTTTCTGTGACAACAACAAAGAACATGTTGTTGGCTTAAACTTTTCAGGTTTAGGCCTCACTGGCCCCATTCCTGATAACACCATAGGCAAGCTCAGCAAGCTTCAAACTTTGGATCTTAGCTGCAACAAAATCACAACTTTGCCTTCAGATTTTTGGAGTTTAAGCACTATCAAGAGCCTCAACCTCTCCACCAATCAGATTTCAGGTTCATTGACCAACAACATTGGCAACTTTGGTATGCTTGAAGCCATTGACTTGTCAAGCAACAACTTCACTGATGAAATTCCAGAAGCTATTGGATCCCTCATGAGTTTGAGAGTCCTCAAACTTGACCATAACAGATTTTCAAGAAGCATTCCTGCTGGGATTCTCAAGTGCCAGTCACTAGTTTCAATTGATCTCTCATCAAATCAGTTGAATGGAACACTTCCAACTGGTTTTGCTGCTGCTTTTCCTAAGCTCAAGACCTTAAACATTGCTGCCAATGACATCGATGGCCGAATCGTCGACATTTCAGGTTTCAATTCCATTCAAAGTCTCAACATATCTGGAAACTCCTTTCAGGGTTCTATCATGGGTGTGTTTCAGGAAAAGTTGGAGGTATTGGACCTAAGCAGAAACCAATTTCAAGGCCACATTTCTCAGGTACAATCCTACAATTGGTCTCATTTGGTTTATCTTGATTTGTCAGGGAATCAGCTGAGTGGTGAGATTTTCCAAAACTTGTTGAGTGAGTCCTTGTTGAATCTGAAGCATCTCAATCTTGCACACAATAGATTCTCCAAACAGAAATTCCCAACAAAGATTGAAAAGCTTAAGGGATTGGAGTATCTGAACTTGTCCAAAACCAATCTTTTAGGACAAATCCCTGATGAAATCTCACAACTGAGTAATCTCAATGCTCTTGATCTTTCTATGAATAGTCTTGCTGACATTCACCCTGATGTGCTTGAATCAGCATTCTTTGGATCAGTGAACAGCTGTCCAATTGCTGCAGACCCACATTTCTTCAGGAGAAAGAACAATGGACACAACAAGGGAATGGAGCTAGCATTGGTGTTAACCTTCTCAATGATCTTCATGCTTGCTGGCCTCTTGTTCTTAGCATTTGGCTGCCGAAGGAAATCAAAAATGTGGGAAGTTAAACAAACTTCATACAAAGAAGAGCAGAACATTTCAGGGCCTTTCTCATTCCAGACTGATTCAACAACCTGGGTGGCTGATGTTAAGCAGGCAACATCAGTGCCAGTGGTGATCTTTGAGAAGCCTTTGTTGAACATCACATTTGCAGACTTATTGGCTGCAACCTCGAATTTCGACCGAGGTACTCTCTTGGCCGAAGGAAAATTCGGTCCGGTCTACAGTGGATTCCTCCCTGGTGGCATTCATGTAGCAGTTAAAGTTTTGGTGGTTGGTTCTACATTGACAGATCAAGAAGCTGCAAGAGAGCTTGAGTTTCTAGGCAGAATCAAGCATCCTAATCTTGTTCCTTTAACTGGATATTGTGTAGCTGGGGATCAAAGGATTGCTATATATGATTATATGGAGAATGGAAACTTGCAAAATCTGCTATATGATTTGCCACTTGGTGTGCAAAGCACTGATGATTGGAGCACAGATACATGGGATGAATCAGACAACAATGGAATTCAGAATGCTGGCTCTGAAGGATTGCTCACAACTTGGAGATTTCGCCACAAAATAGCCCTTGGAACTGCCCGAGCACTTGCATTCTTGCATCATGGATGCTCTCCTCCAATCATTCACAGAGCAGTTAAGGCCAGCAGTGTTTATTTGGACTATGATCTCGAGCCGAGGCTGTCTGATTTCGGCCTGGCTAAGATCTTTGGAAGTGGCTTGGACGAGGAGATTGCTCTTGGATCACCCGGTTATGTTCCTCCAGAGTTTTCTCAACAGGAATTCGACTCGCCAACTACGAAATCTGATGTGTATTGTTATGGAGTTGTGCTCTTTGAGCTAGTAACCGGAAAGAAGCCCGTGGGAGATGATTACCCTGATGATAAGGAATCAACTTTGGTTAGCTGGGTGAGAGGACTAGTTAAAAAGAATCAAGCTTCAAGAGCAATTGATCCAAAGATTAGGGACACAGGACTAGATGAACAAATGGAGGAGGCTCTCAAGATTGGTTATCTTTGCACTGCTGACTTGCCTGCCAAGCGACCAACAATGCAGCAGATTGTTGGACTTCTAAAAGACATTGAACCTGTTTCTTCTAATTAG | 2424 | 0.4253 | MGLGVFGTVLILGLLFKHLASQQPNTDEFYVFEFLKKMASNSSSSFSSSQASASVCSCQGVFCDNNKEHVVGLNFSGLGLTGPIPDNTIGKLSKLQTLDLSCNKITTLPSDFWSLSTIKSLNLSTNQISGSLTNNIGNFGMLEAIDLSSNNFTDEIPEAIGSLMSLRVLKLDHNRFSRSIPAGILKCQSLVSIDLSSNQLNGTLPTGFAAAFPKLKTLNIAANDIDGRIVDISGFNSIQSLNISGNSFQGSIMGVFQEKLEVLDLSRNQFQGHISQVQSYNWSHLVYLDLSGNQLSGEIFQNLLSESLLNLKHLNLAHNRFSKQKFPTKIEKLKGLEYLNLSKTNLLGQIPDEISQLSNLNALDLSMNSLADIHPDVLESAFFGSVNSCPIAADPHFFRRKNNGHNKGMELALVLTFSMIFMLAGLLFLAFGCRRKSKMWEVKQTSYKEEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYSGFLPGGIHVAVKVLVVGSTLTDQEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWDESDNNGIQNAGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIALGSPGYVPPEFSQQEFDSPTTKSDVYCYGVVLFELVTGKKPVGDDYPDDKESTLVSWVRGLVKKNQASRAIDPKIRDTGLDEQMEEALKIGYLCTADLPAKRPTMQQIVGLLKDIEPVSSN | 807 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60448g00001 | 807 | Pfam | Leucine rich repeat | 238 | 295 | IPR001611 | GO:0005515 | |
Stsc60448g00001 | 807 | Pfam | Leucine rich repeat | 84 | 128 | IPR001611 | GO:0005515 | |
Stsc60448g00001 | 807 | Pfam | Leucine rich repeat | 142 | 200 | IPR001611 | GO:0005515 | |
Stsc60448g00001 | 807 | ProSiteProfiles | Protein kinase domain profile. | 500 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc60448g00001 | 807 | FunFam | Nuclear pore complex protein NUP107 | 25 | 182 | - | - | |
Stsc60448g00001 | 807 | Gene3D | Ribonuclease Inhibitor | 182 | 279 | IPR032675 | - | |
Stsc60448g00001 | 807 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 233 | 377 | - | - | |
Stsc60448g00001 | 807 | Gene3D | Phosphorylase Kinase; domain 1 | 460 | 575 | - | - | |
Stsc60448g00001 | 807 | SUPERFAMILY | Protein kinase-like (PK-like) | 477 | 798 | IPR011009 | - | |
Stsc60448g00001 | 807 | PRINTS | Leucine-rich repeat signature | 285 | 298 | - | - | |
Stsc60448g00001 | 807 | PRINTS | Leucine-rich repeat signature | 357 | 370 | - | - | |
Stsc60448g00001 | 807 | Pfam | Protein tyrosine and serine/threonine kinase | 504 | 796 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc60448g00001 | 807 | SMART | LRR_typ_2 | 163 | 187 | IPR003591 | - | |
Stsc60448g00001 | 807 | SMART | LRR_typ_2 | 357 | 380 | IPR003591 | - | |
Stsc60448g00001 | 807 | SMART | LRR_typ_2 | 308 | 333 | IPR003591 | - | |
Stsc60448g00001 | 807 | SMART | LRR_typ_2 | 92 | 115 | IPR003591 | - | |
Stsc60448g00001 | 807 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 461 | 575 | - | - | |
Stsc60448g00001 | 807 | SUPERFAMILY | L domain-like | 50 | 378 | - | - | |
Stsc60448g00001 | 807 | FunFam | Calmodulin-binding receptor kinase CaMRLK | 258 | 374 | - | - | |
Stsc60448g00001 | 807 | Gene3D | Ribonuclease Inhibitor | 27 | 181 | IPR032675 | - | |
Stsc60448g00001 | 807 | ProSiteProfiles | Leucine-rich repeat profile. | 94 | 115 | IPR001611 | GO:0005515 | |
Stsc60448g00001 | 807 | Gene3D | Ribonuclease Inhibitor | 280 | 396 | IPR032675 | - | |
Stsc60448g00001 | 807 | Gene3D | Transferase(Phosphotransferase) domain 1 | 576 | 806 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60448g00001 | Stsc-Chr60448 | 3285 | 5883 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60448g00001 | 66 | 802 | Receptor kinase-like Gene Family | AT4G39400 | 35.927 | 3.93e-120 | 389 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-2 | Stsc60448g00001 | PK_Tyr_Ser-Thr | 1.9e-30 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60448g00001 | - | - | adu:107459185 | 1415.98 |